gene detail

Gene description

TAIR ID: AT3G25882

Short description: NIM1-interacting 2

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of systemic acquired resistance

GO cellular component

nucleus

GO molecular function

protein binding

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G11260, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

22 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	7.16	1.51E-17
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.68	2.41E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	7.22	2.05E-17
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	6.63	3.80E-17
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	6.81	2.23E-17
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	7.69	7.13E-18
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	5.00	2.22E-11
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	4.76	6.05E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	6.87	7.95E-14
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	3.06	4.46E-08
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	1.74	1.00E-04
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.24	5.45E-06
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.59	2.67E-07
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.62	2.51E-03
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.08	3.88E-05
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.72	6.76E-04
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.37	2.40E-06
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	1.63	3.41E-03
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	1.64	3.08E-03
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	1.60	1.96E-03
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	1.59	2.98E-03
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.92	1.93E-04