co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G25882

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006983: ER overload response	0.00E+00
2	GO:0032499: detection of peptidoglycan	0.00E+00
3	GO:0006182: cGMP biosynthetic process	0.00E+00
4	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
5	GO:0010647: positive regulation of cell communication	0.00E+00
6	GO:1902001: fatty acid transmembrane transport	0.00E+00
7	GO:0042350: GDP-L-fucose biosynthetic process	0.00E+00
8	GO:0006216: cytidine catabolic process	0.00E+00
9	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
10	GO:0033198: response to ATP	0.00E+00
11	GO:0002764: immune response-regulating signaling pathway	0.00E+00
12	GO:0006005: L-fucose biosynthetic process	0.00E+00
13	GO:0046109: uridine biosynthetic process	0.00E+00
14	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
15	GO:0046680: response to DDT	0.00E+00
16	GO:0006468: protein phosphorylation	3.61E-06
17	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	3.19E-05
18	GO:0046470: phosphatidylcholine metabolic process	4.53E-04
19	GO:0010045: response to nickel cation	4.59E-04
20	GO:0032491: detection of molecule of fungal origin	4.59E-04
21	GO:0019567: arabinose biosynthetic process	4.59E-04
22	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	4.59E-04
23	GO:0033306: phytol metabolic process	4.59E-04
24	GO:0000032: cell wall mannoprotein biosynthetic process	4.59E-04
25	GO:0006643: membrane lipid metabolic process	4.59E-04
26	GO:0006952: defense response	4.79E-04
27	GO:0015031: protein transport	4.89E-04
28	GO:0016559: peroxisome fission	5.66E-04
29	GO:0010112: regulation of systemic acquired resistance	8.26E-04
30	GO:0051258: protein polymerization	9.90E-04
31	GO:0060919: auxin influx	9.90E-04
32	GO:0010271: regulation of chlorophyll catabolic process	9.90E-04
33	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	9.90E-04
34	GO:0015012: heparan sulfate proteoglycan biosynthetic process	9.90E-04
35	GO:0071668: plant-type cell wall assembly	9.90E-04
36	GO:0002221: pattern recognition receptor signaling pathway	9.90E-04
37	GO:0080181: lateral root branching	9.90E-04
38	GO:0006024: glycosaminoglycan biosynthetic process	9.90E-04
39	GO:0055088: lipid homeostasis	9.90E-04
40	GO:0015908: fatty acid transport	9.90E-04
41	GO:0010115: regulation of abscisic acid biosynthetic process	9.90E-04
42	GO:0044419: interspecies interaction between organisms	9.90E-04
43	GO:0043066: negative regulation of apoptotic process	9.90E-04
44	GO:0005976: polysaccharide metabolic process	9.90E-04
45	GO:0031349: positive regulation of defense response	9.90E-04
46	GO:0010042: response to manganese ion	9.90E-04
47	GO:0006886: intracellular protein transport	1.03E-03
48	GO:0007166: cell surface receptor signaling pathway	1.08E-03
49	GO:0009617: response to bacterium	1.16E-03
50	GO:0000266: mitochondrial fission	1.49E-03
51	GO:0016045: detection of bacterium	1.61E-03
52	GO:0010359: regulation of anion channel activity	1.61E-03
53	GO:0044375: regulation of peroxisome size	1.61E-03
54	GO:0033591: response to L-ascorbic acid	1.61E-03
55	GO:0015695: organic cation transport	1.61E-03
56	GO:1900055: regulation of leaf senescence	1.61E-03
57	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.61E-03
58	GO:0002230: positive regulation of defense response to virus by host	1.61E-03
59	GO:0034605: cellular response to heat	1.92E-03
60	GO:0070588: calcium ion transmembrane transport	2.15E-03
61	GO:0010053: root epidermal cell differentiation	2.15E-03
62	GO:0006499: N-terminal protein myristoylation	2.19E-03
63	GO:0007568: aging	2.32E-03
64	GO:0015696: ammonium transport	2.34E-03
65	GO:0071323: cellular response to chitin	2.34E-03
66	GO:1902290: positive regulation of defense response to oomycetes	2.34E-03
67	GO:0046713: borate transport	2.34E-03
68	GO:0009298: GDP-mannose biosynthetic process	2.34E-03
69	GO:0072334: UDP-galactose transmembrane transport	2.34E-03
70	GO:0030100: regulation of endocytosis	2.34E-03
71	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.34E-03
72	GO:0009226: nucleotide-sugar biosynthetic process	2.34E-03
73	GO:2000377: regulation of reactive oxygen species metabolic process	2.66E-03
74	GO:0080147: root hair cell development	2.66E-03
75	GO:0080142: regulation of salicylic acid biosynthetic process	3.14E-03
76	GO:0045227: capsule polysaccharide biosynthetic process	3.14E-03
77	GO:0072488: ammonium transmembrane transport	3.14E-03
78	GO:0033358: UDP-L-arabinose biosynthetic process	3.14E-03
79	GO:0071219: cellular response to molecule of bacterial origin	3.14E-03
80	GO:0009229: thiamine diphosphate biosynthetic process	4.03E-03
81	GO:0016094: polyprenol biosynthetic process	4.03E-03
82	GO:0034052: positive regulation of plant-type hypersensitive response	4.03E-03
83	GO:0006470: protein dephosphorylation	4.71E-03
84	GO:0009228: thiamine biosynthetic process	4.99E-03
85	GO:0033365: protein localization to organelle	4.99E-03
86	GO:0006574: valine catabolic process	4.99E-03
87	GO:0006014: D-ribose metabolic process	4.99E-03
88	GO:0009972: cytidine deamination	4.99E-03
89	GO:0010315: auxin efflux	4.99E-03
90	GO:0045491: xylan metabolic process	4.99E-03
91	GO:0007165: signal transduction	5.01E-03
92	GO:0035556: intracellular signal transduction	5.07E-03
93	GO:0006486: protein glycosylation	5.29E-03
94	GO:0031930: mitochondria-nucleus signaling pathway	6.02E-03
95	GO:0048509: regulation of meristem development	6.02E-03
96	GO:0010555: response to mannitol	6.02E-03
97	GO:2000067: regulation of root morphogenesis	6.02E-03
98	GO:0009749: response to glucose	6.12E-03
99	GO:0007264: small GTPase mediated signal transduction	7.00E-03
100	GO:1900057: positive regulation of leaf senescence	7.11E-03
101	GO:0010038: response to metal ion	7.11E-03
102	GO:0010044: response to aluminum ion	7.11E-03
103	GO:0009850: auxin metabolic process	8.28E-03
104	GO:0043068: positive regulation of programmed cell death	8.28E-03
105	GO:0009787: regulation of abscisic acid-activated signaling pathway	8.28E-03
106	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	8.28E-03
107	GO:0009819: drought recovery	8.28E-03
108	GO:1900150: regulation of defense response to fungus	8.28E-03
109	GO:0006997: nucleus organization	9.51E-03
110	GO:0010204: defense response signaling pathway, resistance gene-independent	9.51E-03
111	GO:0030968: endoplasmic reticulum unfolded protein response	9.51E-03
112	GO:0009808: lignin metabolic process	9.51E-03
113	GO:0010208: pollen wall assembly	9.51E-03
114	GO:0007186: G-protein coupled receptor signaling pathway	9.51E-03
115	GO:0010497: plasmodesmata-mediated intercellular transport	9.51E-03
116	GO:0046916: cellular transition metal ion homeostasis	1.08E-02
117	GO:0009060: aerobic respiration	1.08E-02
118	GO:0015780: nucleotide-sugar transport	1.08E-02
119	GO:0006098: pentose-phosphate shunt	1.08E-02
120	GO:0019432: triglyceride biosynthetic process	1.08E-02
121	GO:0080144: amino acid homeostasis	1.08E-02
122	GO:0016192: vesicle-mediated transport	1.12E-02
123	GO:1900426: positive regulation of defense response to bacterium	1.22E-02
124	GO:0010380: regulation of chlorophyll biosynthetic process	1.22E-02
125	GO:0043069: negative regulation of programmed cell death	1.36E-02
126	GO:0010043: response to zinc ion	1.44E-02
127	GO:0009750: response to fructose	1.50E-02
128	GO:0030148: sphingolipid biosynthetic process	1.50E-02
129	GO:0000038: very long-chain fatty acid metabolic process	1.50E-02
130	GO:0009682: induced systemic resistance	1.50E-02
131	GO:0019684: photosynthesis, light reaction	1.50E-02
132	GO:0043085: positive regulation of catalytic activity	1.50E-02
133	GO:0045037: protein import into chloroplast stroma	1.66E-02
134	GO:0010150: leaf senescence	1.67E-02
135	GO:0006006: glucose metabolic process	1.81E-02
136	GO:0018107: peptidyl-threonine phosphorylation	1.81E-02
137	GO:0006979: response to oxidative stress	1.82E-02
138	GO:0006897: endocytosis	1.88E-02
139	GO:0010540: basipetal auxin transport	1.98E-02
140	GO:0007034: vacuolar transport	1.98E-02
141	GO:0009744: response to sucrose	2.04E-02
142	GO:0009225: nucleotide-sugar metabolic process	2.14E-02
143	GO:0007031: peroxisome organization	2.14E-02
144	GO:0010167: response to nitrate	2.14E-02
145	GO:0046688: response to copper ion	2.14E-02
146	GO:0019853: L-ascorbic acid biosynthetic process	2.14E-02
147	GO:0034976: response to endoplasmic reticulum stress	2.32E-02
148	GO:0009863: salicylic acid mediated signaling pathway	2.49E-02
149	GO:0006825: copper ion transport	2.67E-02
150	GO:0051302: regulation of cell division	2.67E-02
151	GO:0003333: amino acid transmembrane transport	2.86E-02
152	GO:0007005: mitochondrion organization	3.05E-02
153	GO:0030245: cellulose catabolic process	3.05E-02
154	GO:0006012: galactose metabolic process	3.25E-02
155	GO:0009306: protein secretion	3.45E-02
156	GO:0010584: pollen exine formation	3.45E-02
157	GO:0045492: xylan biosynthetic process	3.45E-02
158	GO:0006284: base-excision repair	3.45E-02
159	GO:0009626: plant-type hypersensitive response	3.47E-02
160	GO:0009620: response to fungus	3.58E-02
161	GO:0070417: cellular response to cold	3.65E-02
162	GO:0042391: regulation of membrane potential	3.86E-02
163	GO:0080022: primary root development	3.86E-02
164	GO:0000413: protein peptidyl-prolyl isomerization	3.86E-02
165	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.94E-02
166	GO:0010200: response to chitin	3.94E-02
167	GO:0018105: peptidyl-serine phosphorylation	4.03E-02
168	GO:0006662: glycerol ether metabolic process	4.07E-02
169	GO:0071472: cellular response to salt stress	4.07E-02
170	GO:0046777: protein autophosphorylation	4.10E-02
171	GO:0009646: response to absence of light	4.28E-02
172	GO:0019252: starch biosynthetic process	4.50E-02
173	GO:0045454: cell redox homeostasis	4.71E-02
174	GO:0042742: defense response to bacterium	4.71E-02
175	GO:0006891: intra-Golgi vesicle-mediated transport	4.72E-02
176	GO:0002229: defense response to oomycetes	4.72E-02
177	GO:0009630: gravitropism	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
3	GO:0050334: thiaminase activity	0.00E+00
4	GO:2001080: chitosan binding	0.00E+00
5	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
6	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
7	GO:0050577: GDP-L-fucose synthase activity	0.00E+00
8	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
9	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
10	GO:0050220: prostaglandin-E synthase activity	0.00E+00
11	GO:0047844: deoxycytidine deaminase activity	0.00E+00
12	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
13	GO:0016301: kinase activity	9.43E-06
14	GO:0004674: protein serine/threonine kinase activity	9.49E-06
15	GO:0008320: protein transmembrane transporter activity	1.52E-05
16	GO:0019199: transmembrane receptor protein kinase activity	1.20E-04
17	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.42E-04
18	GO:0005459: UDP-galactose transmembrane transporter activity	1.85E-04
19	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	4.59E-04
20	GO:0019707: protein-cysteine S-acyltransferase activity	4.59E-04
21	GO:0015245: fatty acid transporter activity	4.59E-04
22	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	4.59E-04
23	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	4.59E-04
24	GO:0004476: mannose-6-phosphate isomerase activity	4.59E-04
25	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.66E-04
26	GO:0004630: phospholipase D activity	6.90E-04
27	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	6.90E-04
28	GO:0030775: glucuronoxylan 4-O-methyltransferase activity	9.90E-04
29	GO:0045140: inositol phosphoceramide synthase activity	9.90E-04
30	GO:0004713: protein tyrosine kinase activity	1.13E-03
31	GO:0008375: acetylglucosaminyltransferase activity	1.58E-03
32	GO:0004751: ribose-5-phosphate isomerase activity	1.61E-03
33	GO:0004383: guanylate cyclase activity	1.61E-03
34	GO:0001664: G-protein coupled receptor binding	1.61E-03
35	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.61E-03
36	GO:0016531: copper chaperone activity	1.61E-03
37	GO:0016174: NAD(P)H oxidase activity	1.61E-03
38	GO:0031683: G-protein beta/gamma-subunit complex binding	1.61E-03
39	GO:0005524: ATP binding	1.71E-03
40	GO:0004672: protein kinase activity	2.05E-03
41	GO:0005460: UDP-glucose transmembrane transporter activity	2.34E-03
42	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.34E-03
43	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	2.34E-03
44	GO:0050373: UDP-arabinose 4-epimerase activity	3.14E-03
45	GO:0010328: auxin influx transmembrane transporter activity	3.14E-03
46	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.22E-03
47	GO:0005496: steroid binding	4.03E-03
48	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	4.03E-03
49	GO:0008725: DNA-3-methyladenine glycosylase activity	4.03E-03
50	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	4.03E-03
51	GO:0002094: polyprenyltransferase activity	4.03E-03
52	GO:0008519: ammonium transmembrane transporter activity	4.99E-03
53	GO:0005509: calcium ion binding	5.43E-03
54	GO:0016853: isomerase activity	5.70E-03
55	GO:0050662: coenzyme binding	5.70E-03
56	GO:0003978: UDP-glucose 4-epimerase activity	6.02E-03
57	GO:0004144: diacylglycerol O-acyltransferase activity	6.02E-03
58	GO:0004656: procollagen-proline 4-dioxygenase activity	6.02E-03
59	GO:0004126: cytidine deaminase activity	6.02E-03
60	GO:0102391: decanoate--CoA ligase activity	6.02E-03
61	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.02E-03
62	GO:0004747: ribokinase activity	6.02E-03
63	GO:0004467: long-chain fatty acid-CoA ligase activity	7.11E-03
64	GO:0008865: fructokinase activity	8.28E-03
65	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.08E-02
66	GO:0030247: polysaccharide binding	1.12E-02
67	GO:0008171: O-methyltransferase activity	1.36E-02
68	GO:0008047: enzyme activator activity	1.36E-02
69	GO:0004871: signal transducer activity	1.46E-02
70	GO:0008559: xenobiotic-transporting ATPase activity	1.50E-02
71	GO:0015198: oligopeptide transporter activity	1.66E-02
72	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.73E-02
73	GO:0050661: NADP binding	1.80E-02
74	GO:0031072: heat shock protein binding	1.81E-02
75	GO:0005262: calcium channel activity	1.81E-02
76	GO:0005388: calcium-transporting ATPase activity	1.81E-02
77	GO:0010329: auxin efflux transmembrane transporter activity	1.81E-02
78	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.81E-02
79	GO:0004190: aspartic-type endopeptidase activity	2.14E-02
80	GO:0030552: cAMP binding	2.14E-02
81	GO:0030553: cGMP binding	2.14E-02
82	GO:0008061: chitin binding	2.14E-02
83	GO:0004725: protein tyrosine phosphatase activity	2.32E-02
84	GO:0051287: NAD binding	2.47E-02
85	GO:0031418: L-ascorbic acid binding	2.49E-02
86	GO:0003954: NADH dehydrogenase activity	2.49E-02
87	GO:0005216: ion channel activity	2.67E-02
88	GO:0033612: receptor serine/threonine kinase binding	2.86E-02
89	GO:0005516: calmodulin binding	2.90E-02
90	GO:0043531: ADP binding	3.24E-02
91	GO:0008810: cellulase activity	3.25E-02
92	GO:0005525: GTP binding	3.36E-02
93	GO:0003756: protein disulfide isomerase activity	3.45E-02
94	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.45E-02
95	GO:0047134: protein-disulfide reductase activity	3.65E-02
96	GO:0005102: receptor binding	3.65E-02
97	GO:0005249: voltage-gated potassium channel activity	3.86E-02
98	GO:0030551: cyclic nucleotide binding	3.86E-02
99	GO:0015035: protein disulfide oxidoreductase activity	4.03E-02
100	GO:0004791: thioredoxin-disulfide reductase activity	4.28E-02
101	GO:0019901: protein kinase binding	4.50E-02
102	GO:0004197: cysteine-type endopeptidase activity	4.95E-02
103	GO:0042803: protein homodimerization activity	4.98E-02