gene detail

Gene description

TAIR ID: AT3G25070

Short description: RPM1 interacting protein 4

Pathogen responsiveness: -0.95

General responsiveness: -1.37

Orthologous

Rice:

OS08G0526400

Maize:

GRMZM2G703858

Wheat:

TAAFFX.78327.1.S1_AT

GO biological process

negative regulation of plant-type hypersensitive response, defense response signaling pathway, resistance gene-independent, protein phosphorylation, defense response to bacterium, incompatible interaction, response to molecule of bacterial origin, plant-type hypersensitive response

GO cellular component

plasma membrane, extrinsic component of plasma membrane, membrane, endomembrane system, nucleus

GO molecular function

protein binding

Protein domain

Pfam	PF05627, Cleavage site for pathogenic type III effector avirulence factor Avr

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 15 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.96	4.71E-05
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.50	7.39E-04
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.97	4.54E-05
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.28	8.95E-06
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.24	9.70E-06
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.72	8.96E-11
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	1.68	9.13E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.67	8.94E-09