gene detail

Gene description

TAIR ID: AT3G24220

Short description: nine-cis-epoxycarotenoid dioxygenase 6

Pathogen responsiveness: -1.68

General responsiveness: -3.53

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to red light, response to red or far red light, abscisic acid biosynthetic process, oxidation-reduction process

GO cellular component

chloroplast thylakoid membrane, chloroplast stroma, chloroplast

GO molecular function

metal ion binding, 9-cis-epoxycarotenoid dioxygenase activity

Protein domain

Pfam	PF03055, Retinal pigment epithelial membrane protein

Metabolic pathway

PWY-695: abscisic acid biosynthesis

KEGG pathway

PATH:ath00906: Carotenoid biosynthesis

Transcriptional regulation

Regulator:
AT3G27920, AT2G20180

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

No coexpression gene

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-6.22	9.60E-14
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.05	1.37E-02