gene detail

Gene description

TAIR ID: AT3G23690

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -1.86

General responsiveness: -2.02

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, transcription

GO cellular component

nucleus

GO molecular function

protein dimerization activity, transcription factor activity, sequence-specific DNA binding, protein binding

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT4G36990

Target:
AT2G34710, AT1G62990

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.69	1.98E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.56	1.54E-13
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.69	1.64E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.51	5.86E-05