gene detail

Gene description

TAIR ID: AT3G23100

Short description: homolog of human DNA ligase iv-binding protein XRCC4

Pathogen responsiveness: -2.98

General responsiveness: -4.41

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G001869

Wheat: No orthologous gene

GO biological process

double-strand break repair via nonhomologous end joining, DNA recombination

GO cellular component

nucleus

GO molecular function

protein binding, DNA binding, ATP binding

Protein domain

Pfam	PF06632, DNA double-strand break repair and V(D)J recombination protein XRCC4

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03450: Non-homologous end-joining

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT3G14230

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition