Gene: AT3G20860
     


Gene description


TAIR ID: AT3G20860

Short description: NIMA-related kinase 5

Pathogen responsiveness: 0.36

General responsiveness: -0.91

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G172900  

Wheat: No orthologous gene

GO biological process


protein phosphorylation, negative regulation of ethylene biosynthetic process, cortical microtubule organization, lateral root formation


GO cellular component


plasma membrane


GO molecular function


kinase activity, protein serine/threonine kinase activity, ATP binding


Protein domain


PfamPF00069, Protein kinase domain
SMARTSM00220, S_TKc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


25 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, erf104 ko, water 4 hCol, erf104 ko, Flg22 4 h1.522.49E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h2.097.39E-03
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h2.391.84E-03
GSE17464Laer, controlLaer, Flg22 1 h3.617.42E-07
GSE17464Laer, controlLaer, Flg22 2 h3.522.94E-06
GSE17464Penta, controlPenta, Flg22 2 h3.569.82E-07
GSE17464Penta, controlPenta, Flg22 2 h3.572.00E-06
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.661.18E-02
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.723.46E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.701.71E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.293.07E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.856.90E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.071.02E-13
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.821.03E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.739.51E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.704.33E-10
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h1.762.67E-08
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.023.63E-09
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h2.632.01E-07
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.285.35E-07
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h3.217.30E-11
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h3.291.05E-02
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h1.802.73E-04
GSE62537Col, WT, control 48 hCol, WT, V.longisporum 48 h1.805.33E-03
GSE62537Col, ndr1, control 48 hCol, ndr1, V.longisporum 48 h2.241.31E-03






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