co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G20860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
2	GO:0009225: nucleotide-sugar metabolic process	1.18E-06
3	GO:0045227: capsule polysaccharide biosynthetic process	2.51E-06
4	GO:0033358: UDP-L-arabinose biosynthetic process	2.51E-06
5	GO:0000266: mitochondrial fission	5.92E-05
6	GO:0046939: nucleotide phosphorylation	1.17E-04
7	GO:0048480: stigma development	1.17E-04
8	GO:0006012: galactose metabolic process	1.72E-04
9	GO:0010447: response to acidic pH	2.00E-04
10	GO:0002679: respiratory burst involved in defense response	2.94E-04
11	GO:0009694: jasmonic acid metabolic process	3.94E-04
12	GO:0033320: UDP-D-xylose biosynthetic process	3.94E-04
13	GO:0010107: potassium ion import	3.94E-04
14	GO:0030041: actin filament polymerization	5.00E-04
15	GO:0045487: gibberellin catabolic process	5.00E-04
16	GO:0033365: protein localization to organelle	6.13E-04
17	GO:0042732: D-xylose metabolic process	6.13E-04
18	GO:0048317: seed morphogenesis	6.13E-04
19	GO:0009737: response to abscisic acid	6.95E-04
20	GO:0010200: response to chitin	7.24E-04
21	GO:0010044: response to aluminum ion	8.54E-04
22	GO:0045010: actin nucleation	9.81E-04
23	GO:0051865: protein autoubiquitination	1.25E-03
24	GO:0008202: steroid metabolic process	1.40E-03
25	GO:0072593: reactive oxygen species metabolic process	1.70E-03
26	GO:1903507: negative regulation of nucleic acid-templated transcription	1.70E-03
27	GO:0010152: pollen maturation	1.86E-03
28	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.86E-03
29	GO:0002213: defense response to insect	1.86E-03
30	GO:0046686: response to cadmium ion	2.02E-03
31	GO:0009738: abscisic acid-activated signaling pathway	2.20E-03
32	GO:0009695: jasmonic acid biosynthetic process	2.93E-03
33	GO:0016226: iron-sulfur cluster assembly	3.32E-03
34	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.32E-03
35	GO:0007005: mitochondrion organization	3.32E-03
36	GO:0009686: gibberellin biosynthetic process	3.52E-03
37	GO:0019722: calcium-mediated signaling	3.73E-03
38	GO:0006817: phosphate ion transport	3.73E-03
39	GO:0010118: stomatal movement	4.15E-03
40	GO:0048653: anther development	4.15E-03
41	GO:0048868: pollen tube development	4.37E-03
42	GO:0009960: endosperm development	4.37E-03
43	GO:0010154: fruit development	4.37E-03
44	GO:0006970: response to osmotic stress	4.71E-03
45	GO:0009749: response to glucose	4.81E-03
46	GO:0009723: response to ethylene	5.06E-03
47	GO:0009414: response to water deprivation	5.43E-03
48	GO:0009639: response to red or far red light	5.75E-03
49	GO:0010286: heat acclimation	6.00E-03
50	GO:0009651: response to salt stress	6.46E-03
51	GO:0009615: response to virus	6.50E-03
52	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	6.75E-03
53	GO:0009407: toxin catabolic process	8.37E-03
54	GO:0009753: response to jasmonic acid	8.58E-03
55	GO:0009867: jasmonic acid mediated signaling pathway	9.22E-03
56	GO:0006839: mitochondrial transport	1.01E-02
57	GO:0009873: ethylene-activated signaling pathway	1.03E-02
58	GO:0009636: response to toxic substance	1.20E-02
59	GO:0031347: regulation of defense response	1.26E-02
60	GO:0006364: rRNA processing	1.36E-02
61	GO:0009555: pollen development	1.42E-02
62	GO:0009611: response to wounding	1.45E-02
63	GO:0006355: regulation of transcription, DNA-templated	1.51E-02
64	GO:0009620: response to fungus	1.64E-02
65	GO:0000398: mRNA splicing, via spliceosome	1.93E-02
66	GO:0010468: regulation of gene expression	2.92E-02
67	GO:0009860: pollen tube growth	3.70E-02
68	GO:0007049: cell cycle	3.80E-02
69	GO:0080167: response to karrikin	4.09E-02
70	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.19E-02
71	GO:0006810: transport	4.23E-02
72	GO:0046777: protein autophosphorylation	4.30E-02
73	GO:0006952: defense response	4.82E-02
74	GO:0006869: lipid transport	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0052694: jasmonoyl-isoleucine-12-hydroxylase activity	0.00E+00
2	GO:0050373: UDP-arabinose 4-epimerase activity	2.51E-06
3	GO:0003978: UDP-glucose 4-epimerase activity	9.56E-06
4	GO:0046423: allene-oxide cyclase activity	2.00E-04
5	GO:0019201: nucleotide kinase activity	2.94E-04
6	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.94E-04
7	GO:0004715: non-membrane spanning protein tyrosine kinase activity	2.94E-04
8	GO:0002020: protease binding	5.00E-04
9	GO:0048040: UDP-glucuronate decarboxylase activity	6.13E-04
10	GO:0004017: adenylate kinase activity	7.31E-04
11	GO:0019900: kinase binding	7.31E-04
12	GO:0070403: NAD+ binding	7.31E-04
13	GO:0003950: NAD+ ADP-ribosyltransferase activity	7.31E-04
14	GO:0008143: poly(A) binding	8.54E-04
15	GO:0043295: glutathione binding	8.54E-04
16	GO:0008142: oxysterol binding	1.11E-03
17	GO:0004713: protein tyrosine kinase activity	1.55E-03
18	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.20E-03
19	GO:0003714: transcription corepressor activity	2.74E-03
20	GO:0004707: MAP kinase activity	3.12E-03
21	GO:0019901: protein kinase binding	4.81E-03
22	GO:0003824: catalytic activity	6.30E-03
23	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	8.65E-03
24	GO:0004364: glutathione transferase activity	1.07E-02
25	GO:0051537: 2 iron, 2 sulfur cluster binding	1.16E-02
26	GO:0035091: phosphatidylinositol binding	1.16E-02
27	GO:0043565: sequence-specific DNA binding	1.22E-02
28	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.31E-02
29	GO:0003779: actin binding	1.71E-02
30	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.09E-02
31	GO:0008017: microtubule binding	2.66E-02
32	GO:0044212: transcription regulatory region DNA binding	2.89E-02
33	GO:0003676: nucleic acid binding	3.34E-02
34	GO:0050660: flavin adenine dinucleotide binding	3.90E-02
35	GO:0003729: mRNA binding	4.28E-02
36	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0016363: nuclear matrix	9.56E-06
2	GO:0032580: Golgi cisterna membrane	1.21E-05
3	GO:0005886: plasma membrane	7.24E-04
4	GO:0010494: cytoplasmic stress granule	1.25E-03
5	GO:0071013: catalytic step 2 spliceosome	1.70E-03
6	GO:0005938: cell cortex	2.03E-03
7	GO:0005618: cell wall	2.05E-03
8	GO:0009524: phragmoplast	2.19E-03
9	GO:0005758: mitochondrial intermembrane space	2.74E-03
10	GO:0005741: mitochondrial outer membrane	3.12E-03
11	GO:0046658: anchored component of plasma membrane	3.75E-03
12	GO:0009504: cell plate	4.81E-03
13	GO:0005774: vacuolar membrane	6.78E-03
14	GO:0019005: SCF ubiquitin ligase complex	7.81E-03
15	GO:0090406: pollen tube	1.10E-02
16	GO:0016020: membrane	3.08E-02
17	GO:0005737: cytoplasm	3.72E-02
18	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.75E-02
19	GO:0005874: microtubule	4.00E-02
20	GO:0005634: nucleus	4.15E-02
21	GO:0005773: vacuole	4.57E-02
22	GO:0009506: plasmodesma	4.95E-02