gene detail

Gene description

TAIR ID: AT3G18130

Short description: receptor for activated C kinase 1C

Pathogen responsiveness: -1.18

General responsiveness: -0.42

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

positive regulation of signal transduction, seed germination, signal transduction, shoot system development, cellular response to abscisic acid stimulus, root development

GO cellular component

heterotrimeric G-protein complex, nucleolus, ribosome

GO molecular function

MAP-kinase scaffold activity, signal transducer activity

Protein domain

Pfam	PF00400, WD domain, G-beta repeat
SMART	SM00320, WD40

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 32 (Top5%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.50	1.55E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.52	8.59E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.66	6.15E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.67	2.54E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.78	7.09E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.51	1.07E-10