Gene: AT3G17930
     


Gene description


TAIR ID: AT3G17930

No short description

Pathogen responsiveness: -0.23

General responsiveness: 1.42

Orthologous


Rice:

OS01G0805200  

Maize:

GRMZM2G402092  

Wheat: No orthologous gene

GO biological process


cytochrome b6f complex assembly


GO cellular component


chloroplast thylakoid membrane, chloroplast


GO molecular function


molecular_function


Protein domain


PfamPF11460, Protein of unknown function (DUF3007)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G41315, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


19 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.541.66E-08
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-2.006.63E-04
GSE17464Laer, controlLaer, Flg22 2 h-1.542.53E-03
GSE17464Penta, controlPenta, Flg22 2 h-2.059.30E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.968.67E-09
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.615.30E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.186.19E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.751.69E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.527.09E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.102.01E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.201.09E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.662.12E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.155.87E-12
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.677.11E-08
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.588.22E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.501.10E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.651.05E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.715.15E-07
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.582.11E-02






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