gene detail

Gene description

TAIR ID: AT3G17390

Short description: S-adenosylmethionine synthetase family protein

Pathogen responsiveness: -0.97

General responsiveness: -1.10

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

lignin biosynthetic process, S-adenosylmethionine biosynthetic process, one-carbon metabolic process, response to cold, methionine metabolic process

GO cellular component

plasmodesma, membrane, cytosol, cytoplasm, plasma membrane, nucleolus, cell wall

GO molecular function

methionine adenosyltransferase activity, metal ion binding, ATP binding

Protein domain

Pfam	PF02773, S-adenosylmethionine synthetase, C-terminal domain
Pfam	PF02772, S-adenosylmethionine synthetase, central domain
Pfam	PF00438, S-adenosylmethionine synthetase, N-terminal domain

Metabolic pathway

KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 9 (Top20%)

Coexpression network

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.66	4.38E-05
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.62	1.57E-09
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.30	4.25E-05
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.66	3.48E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.21	4.20E-06
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.69	2.36E-17
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.61	3.29E-08
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-2.16	2.86E-12