Gene: AT3G16565
     

Gene description


TAIR ID: AT3G16565

Short description: alanine-tRNA ligases;nucleic acid binding;ligases, forming aminoacyl-tRNA and related compounds;nucleotide binding;ATP binding

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice:

OS01G0120400  

Maize:

GRMZM2G140754  

Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


cytoplasm


GO molecular function


unkown


Protein domain


PfamPF01411, tRNA synthetases class II (A)
PfamPF07973, Threonyl and Alanyl tRNA synthetase second additional domain
SMARTSM00863, tRNA_SAD

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G62300, AT4G31550, AT4G31800

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


10 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.929.40E-08
GSE40544Col, WT, controlCol, WT, PstDC3000 EV3.094.06E-08
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.761.58E-07
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.721.77E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.695.23E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.565.85E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.971.53E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.962.12E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.446.57E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.202.98E-11






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