gene detail

Gene description

TAIR ID: AT3G16500

Short description: phytochrome-associated protein 1

Pathogen responsiveness: -1.82

General responsiveness: -1.17

Orthologous

Rice: No orthologous gene

Maize:

Wheat:

GO biological process

auxin-activated signaling pathway, transcription, DNA-templated, response to auxin, regulation of transcription

GO cellular component

nucleus

GO molecular function

protein binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF02309, AUX/IAA family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04075: Plant hormone signal transduction

Transcriptional regulation

Regulator:
AT5G13790, AT1G73805, AT5G26920, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 19 (Top10%)

Coexpression network

GSE26679_EDR1_GC view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.68	2.07E-02
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	1.52	1.78E-02
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	2.00	1.25E-06
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.59	7.40E-07