gene detail

Gene description

TAIR ID: AT3G16330

No short description

Pathogen responsiveness: 0.87

General responsiveness: -1.03

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

cellular_component

GO molecular function

molecular_function

Protein domain

Pfam	PF05553, Cotton fibre expressed protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230, AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

29 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	2.13	4.90E-08
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.64	3.55E-07
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.51	1.14E-02
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.62	5.49E-03
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.97	7.80E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	3.36	6.61E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	2.83	7.42E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	3.42	4.35E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.88	3.83E-06
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.01	3.49E-03
GSE37269	Oy0, WT, control	Oy0, WT, TEV 21 d	-2.67	6.83E-03
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.59	4.59E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	4.11	7.97E-16
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.83	4.99E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	3.87	2.35E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	4.51	2.74E-16
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.51	6.18E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	4.14	6.30E-16
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	4.05	9.15E-15
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	4.08	2.30E-14
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	4.53	8.75E-16
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	3.70	4.19E-14
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	3.33	4.07E-04
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	1.76	2.62E-02
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.97	8.70E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	2.52	3.45E-06
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.56	1.14E-12
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.32	9.29E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.88	4.78E-02