Gene: AT3G15720
     

Gene description


TAIR ID: AT3G15720

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: 1.00

General responsiveness: -0.70

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


carbohydrate metabolic process, cell wall organization


GO cellular component


anchored component of membrane, extracellular region, anchored component of plasma membrane, integral component of membrane, plant-type cell wall


GO molecular function


polygalacturonase activity, lyase activity


Protein domain


PfamPF00295, Glycosyl hydrolases family 28
SMARTSM00710, PbH1

Transcriptional regulation


Regulator:
AT5G13790, AT2G43010

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


43 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-3.101.24E-06
GSE17464Laer, controlLaer, Flg22 1 h-3.151.04E-06
GSE17464Laer, controlLaer, Flg22 2 h-3.152.50E-06
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-3.788.11E-09
GSE17464Penta, controlPenta, PstDC3000 12 h-2.632.62E-05
GSE17464Penta, controlPenta, Flg22 2 h-3.987.00E-09
GSE17464Penta, controlPenta, Flg22 2 h-4.232.11E-08
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-3.074.44E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.551.11E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-3.361.82E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.871.29E-07
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA2.141.40E-03
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d2.031.45E-03
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.891.14E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.531.94E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.015.27E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.732.76E-05
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.656.71E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.232.53E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.976.61E-03
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.752.12E-08
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.131.66E-09
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.913.22E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.922.56E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.095.67E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.981.63E-05
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.896.42E-05
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.599.53E-04
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.022.47E-05
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.367.70E-07
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.681.41E-03
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.814.05E-04
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-2.001.25E-04
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.474.69E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.248.66E-06
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.601.09E-03
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h-2.015.76E-05
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h-2.491.30E-06
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-2.788.94E-08
GSE5685Col, WT, control 16 hCol, WT, Ps ES4326 AvrRpt2 16 h-1.513.42E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h-2.201.75E-06
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.851.69E-08
GSE6556Col, WT, controlCol, WT, PstDC3000 AvrRpt2 48 h1.671.32E-03






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