Gene: AT3G14080
     


Gene description


TAIR ID: AT3G14080

Short description: Small nuclear ribonucleoprotein family protein

Pathogen responsiveness: -3.27

General responsiveness: -2.78

Orthologous


Rice:

OS04G0445800   OS05G0594900  

Maize:

GRMZM2G021464  

Wheat: No orthologous gene

GO biological process


RNA metabolic process, deadenylation-dependent decapping of nuclear-transcribed mRNA, nuclear-transcribed mRNA catabolic process, mRNA processing, hyperosmotic salinity response, cold acclimation, response to water deprivation


GO cellular component


viral nucleocapsid, P-body, Lsm1-7-Pat1 complex, nucleus, small nucleolar ribonucleoprotein complex, mRNA cap binding complex, intracellular ribonucleoprotein complex


GO molecular function


RNA cap binding


Protein domain


PfamPF01423, LSM domain
SMARTSM00651, Sm

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT4G18770, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.