gene detail

Gene description

TAIR ID: AT3G11540

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -2.19

General responsiveness: -2.54

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G357804

Wheat:

TA.11129.1.S1_AT

GO biological process

gibberellic acid mediated signaling pathway, cytokinin-activated signaling pathway, protein glycosylation, regulation of reactive oxygen species metabolic process, negative regulation of gibberellic acid mediated signaling pathway, cell differentiation, rhythmic process, flower development

GO cellular component

nucleus, cytosol, cytoplasm

GO molecular function

protein N-acetylglucosaminyltransferase activity, transferase activity, transferring glycosyl groups, protein binding

Protein domain

Pfam	PF13432, Tetratricopeptide repeat
Pfam	PF13844, Glycosyl transferase family 41
Pfam	PF13374, Tetratricopeptide repeat
Pfam	PF00515, Tetratricopeptide repeat
Pfam	PF13181, Tetratricopeptide repeat
SMART	SM00671, SEL1
SMART	SM00028, TPR

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G11260, AT2G20180

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.52	7.20E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.57	4.43E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.75	3.45E-11
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.41	4.67E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.17	6.25E-03