Gene: AT3G06400
     


Gene description


TAIR ID: AT3G06400

Short description: chromatin-remodeling protein 11

Pathogen responsiveness: -2.22

General responsiveness: -1.59

Orthologous


Rice: No orthologous gene
Maize:

AC235535.1_FGT001   GRMZM2G010085  

Wheat: No orthologous gene

GO biological process


positive regulation of cellular response to heat, regulation of unidimensional cell growth, nucleosome organization, regulation of timing of transition from vegetative to reproductive phase, covalent chromatin modification, vegetative to reproductive phase transition of meristem, flower development, embryo sac development, megagametogenesis, nucleosome positioning, ATP-dependent chromatin remodeling


GO cellular component


cytosol, nucleus, NURF complex


GO molecular function


protein binding, ATP binding, nucleosome binding, DNA binding, helicase activity, ATPase activity, DNA-dependent ATPase activity


Protein domain


PfamPF09111, SLIDE
PfamPF00176, SNF2 family N-terminal domain
PfamPF09110, HAND
PfamPF00271, Helicase conserved C-terminal domain
SMARTSM00490, HELICc
SMARTSM00717, SANT
SMARTSM00487, DEXDc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


No regulation information

Protein-protein interaction network


The number of partners (degree) is: 10 (Top20%)

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h1.693.63E-10
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h1.541.64E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.617.94E-03






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