gene detail

Gene description

TAIR ID: AT3G05630

Short description: phospholipase D P2

Pathogen responsiveness: -0.94

General responsiveness: -0.29

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of vesicle-mediated transport, galactolipid biosynthetic process, cellular response to nitrogen starvation, phosphatidic acid biosynthetic process, phospholipid catabolic process, root development, response to auxin, inositol lipid-mediated signaling, cellular response to phosphate starvation, lipid biosynthetic process

GO cellular component

vacuole, nucleus

GO molecular function

phospholipase D activity, phosphatidylinositol binding, N-acylphosphatidylethanolamine-specific phospholipase D activity

Protein domain

Pfam	PF00614, Phospholipase D Active site motif
Pfam	PF13091, PLD-like domain
SMART	SM00233, PH
SMART	SM00155, PLDc

Metabolic pathway

PWY-3561: choline biosynthesis III
PWY-4762: superpathway of choline biosynthesis
PWY-7039: phosphatidate metabolism, as a signaling molecule
LIPASYN-PWY: phospholipases

KEGG pathway

PATH:ath00564: Glycerophospholipid metabolism
PATH:ath00565: Ether lipid metabolism
PATH:ath04144: Endocytosis

Transcriptional regulation

Regulator:
AT2G43010

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.58	7.07E-04
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.29	5.39E-03
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.51	7.34E-05
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.52	2.74E-02
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.55	4.95E-07
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.92	4.84E-03