gene detail

Gene description

TAIR ID: AT3G04230

Short description: Ribosomal protein S5 domain 2-like superfamily protein

Pathogen responsiveness: -1.67

General responsiveness: -0.75

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

translation

GO cellular component

nucleolus, cytosolic ribosome, cytosolic small ribosomal subunit, cytosol, cytoplasm, chloroplast, membrane

GO molecular function

unkown

Protein domain

Pfam	PF00380, Ribosomal protein S9/S16

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03010: Ribosome

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.77	2.51E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.93	1.52E-10
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.64	1.67E-03