gene detail

Gene description

TAIR ID: AT3G04110

Short description: glutamate receptor 1.1

Pathogen responsiveness: -0.53

General responsiveness: -2.30

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

abscisic acid-activated signaling pathway, response to abscisic acid, cellular calcium ion homeostasis, response to light stimulus, potassium ion transport, sodium ion transport, calcium ion transport, cellular cation homeostasis, ion transport

GO cellular component

integral component of membrane

GO molecular function

calcium channel activity, intracellular ligand-gated ion channel activity, sodium channel activity, potassium channel activity, ionotropic glutamate receptor activity, cation channel activity

Protein domain

Pfam	PF00497, Bacterial extracellular solute-binding proteins, family 3
Pfam	PF00060, Ligand-gated ion channel
Pfam	PF01094, Receptor family ligand binding region
SMART	SM00079, PBPe

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G16110, AT5G41315, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 27 (Top10%)

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

11 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.39	2.83E-02
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.72	4.97E-07
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.87	5.50E-08
GSE17464	Penta, control	Penta, PstDC3000 12 h	-1.77	2.20E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.56	3.33E-02
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.64	4.96E-09
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.33	8.68E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.26	1.47E-04
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.77	1.36E-04
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.31	1.54E-06
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min	1.59	4.22E-05