gene detail

Gene description

TAIR ID: AT3G01470

Short description: homeobox 1

Pathogen responsiveness: -1.37

General responsiveness: -0.39

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G021339

Wheat:

TAAFFX.86453.1.S1_AT TAAFFX.86453.1.S1_S_AT

GO biological process

response to blue light, positive regulation of transcription, DNA-templated, response to salt stress, regulation of cell growth, regulation of transcription, transcription, leaf morphogenesis

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, protein homodimerization activity, protein binding

Protein domain

Pfam	PF02183, Homeobox associated leucine zipper
Pfam	PF00046, Homeobox domain
SMART	SM00389, HOX

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G20180

Target:
AT2G19590, AT1G07900

Protein-protein interaction network

The number of partners (degree) is: 5

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE5686_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.97	3.27E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	2.09	8.92E-11
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.76	2.15E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.11	4.78E-11
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.75	2.49E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.00	7.23E-03