gene detail

Gene description

TAIR ID: AT3G01290

Short description: SPFH/Band 7/PHB domain-containing membrane-associated protein family

Pathogen responsiveness: 1.83

General responsiveness: 2.22

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

defense response to fungus

GO cellular component

plasma membrane, vacuole, plasmodesma, membrane, vacuolar membrane, mitochondrion

GO molecular function

unkown

Protein domain

Pfam	PF01145, SPFH domain / Band 7 family
SMART	SM00244, PHB

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G18770

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

57 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	6.09	4.34E-16
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	5.16	3.82E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	5.05	7.79E-16
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	4.70	3.16E-14
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	4.61	2.72E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	4.36	6.69E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	4.13	1.05E-14
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.77	5.84E-13
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	3.64	4.87E-06
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	3.64	2.42E-06

Showing 1 to 10 of 57 entries

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