Gene: AT2G47700
     


Gene description


TAIR ID: AT2G47700

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -2.14

General responsiveness: -1.46

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination, response to red light, red, far-red light phototransduction, regulation of photoperiodism, flowering, flower development, response to far red light, negative regulation of gene expression, regulation of red or far-red light signaling pathway, regulation of gene expression, circadian rhythm


GO cellular component


nucleus, cytoplasm


GO molecular function


protein binding, ubiquitin-protein transferase activity, metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 18 (Top10%)

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.761.89E-12
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.663.51E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.828.29E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.045.26E-14






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.