gene detail

Gene description

TAIR ID: AT2G46450

Short description: cyclic nucleotide-gated channel 12

Pathogen responsiveness: -1.07

General responsiveness: -0.48

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

defense response, response to fungus, response to bacterium, regulation of membrane potential

GO cellular component

integral component of plasma membrane, plasma membrane, integral component of membrane

GO molecular function

calmodulin binding, cation channel activity, cAMP binding, voltage-gated potassium channel activity, cGMP binding, ion channel activity

Protein domain

Pfam	PF00520, Ion transport protein
SMART	SM00100, cNMP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	-1.68	5.65E-03
GSE17464	Penta, control	Penta, Flg22 2 h	-1.77	1.13E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.98	7.07E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.65	8.68E-10
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.52	1.97E-08