gene detail

Gene description

TAIR ID: AT2G46430

Short description: cyclic nucleotide gated channel 3

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of membrane potential

GO cellular component

plasma membrane, integral component of plasma membrane

GO molecular function

ion channel activity, cAMP binding, voltage-gated potassium channel activity, cGMP binding, calmodulin binding

Protein domain

Pfam	PF00520, Ion transport protein
SMART	SM00100, cNMP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT1G24260, AT4G36990, AT4G31800

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

12 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	3.70	2.26E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.60	8.94E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	3.36	1.33E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	3.93	1.09E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.45	8.73E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	3.63	2.81E-13
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.86	7.24E-08
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.97	1.08E-05
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	3.85	4.41E-10
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	2.46	7.95E-07
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.13	6.41E-08
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.24	2.93E-08