gene detail

Gene description

TAIR ID: AT2G45950

Short description: SKP1-like 20

Pathogen responsiveness: -1.68

General responsiveness: -1.70

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

ubiquitin-dependent protein catabolic process, protein ubiquitination

GO cellular component

nucleus

GO molecular function

ubiquitin-protein transferase activity

Protein domain

Pfam	PF01466, Skp1 family, dimerisation domain
SMART	SM00512, Skp1

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G20180

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 14 (Top20%)

Coexpression network

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, Flg22 2 h	-1.68	3.52E-06