gene detail

Gene description

TAIR ID: AT2G45730

Short description: eukaryotic initiation factor 3 gamma subunit family protein

Pathogen responsiveness: -1.77

General responsiveness: -1.46

Orthologous

Rice:

OS04G0112300

Maize:

GRMZM2G121123

Wheat: No orthologous gene

GO biological process

translational initiation, tRNA methylation, regulation of translational initiation

GO cellular component

tRNA (m1A) methyltransferase complex, nucleus

GO molecular function

translation initiation factor activity

Protein domain

Pfam	PF04189, Gcd10p family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G07100, AT4G16110, AT5G22570, AT2G46130, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.55	7.62E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.33	4.46E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.52	3.36E-10