gene detail

Gene description

TAIR ID: AT2G44200

Short description: CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor

Pathogen responsiveness: -1.53

General responsiveness: -1.12

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G080912

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

Pfam	PF10197, N-terminal domain of CBF1 interacting co-repressor CIR
Pfam	PF12542, Pre-mRNA splicing factor
SMART	SM01083, Cir_N

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.87	5.53E-06