gene detail

Gene description

TAIR ID: AT2G44050

Short description: 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase

Pathogen responsiveness: -1.18

General responsiveness: -1.89

Orthologous

Rice:

OS04G0497400

Maize:

GRMZM2G033219

Wheat: No orthologous gene

GO biological process

riboflavin biosynthetic process, jasmonic acid mediated signaling pathway

GO cellular component

chloroplast stroma, chloroplast, riboflavin synthase complex

GO molecular function

6,7-dimethyl-8-ribityllumazine synthase activity, transferase activity

Protein domain

Pfam	PF00885, 6,7-dimethyl-8-ribityllumazine synthase

Metabolic pathway

RIBOSYN2-PWY: flavin biosynthesis I (bacteria and plants)

KEGG pathway

PATH:ath00740: Riboflavin metabolism

Transcriptional regulation

Regulator:
AT1G51600, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.82	5.36E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.62	1.30E-10
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.56	8.38E-11
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.69	5.72E-12