Gene: AT2G43870
     

Gene description


TAIR ID: AT2G43870

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: -0.56

General responsiveness: -0.69

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


carbohydrate metabolic process, cell wall organization


GO cellular component


extracellular region


GO molecular function


polygalacturonase activity, lyase activity


Protein domain


PfamPF00295, Glycosyl hydrolases family 28
SMARTSM00710, PbH1

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G16857, AT4G16110, AT4G18770, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network

GSE56094_WT_PSTDC3000  view

Differentially expressed condition


16 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h1.672.68E-02
GSE17464Laer, controlLaer, Flg22 2 h2.523.80E-04
GSE17464Penta, controlPenta, PstDC3000 12 h-1.791.32E-02
GSE17464Penta, controlPenta, Flg22 2 h2.033.49E-03
GSE26206Col, WT, controlCol, WT, R.solani_AG8 7 d1.621.62E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.151.44E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.544.44E-02
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min-1.661.69E-02
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h-1.572.37E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.747.70E-12
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.661.66E-05
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.872.79E-12
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h3.106.12E-14
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.785.45E-06
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.422.24E-09
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.891.83E-03






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