Gene: AT2G43620
     

Gene description


TAIR ID: AT2G43620

Short description: Chitinase family protein

Pathogen responsiveness: 2.69

General responsiveness: 0.82

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response, polysaccharide catabolic process, cell wall macromolecule catabolic process, chitin catabolic process


GO cellular component


extracellular region, apoplast


GO molecular function


chitinase activity, chitin binding


Protein domain


PfamPF00187, Chitin recognition protein
PfamPF00182, Chitinase class I
SMARTSM00270, ChtBD1

Transcriptional regulation


Regulator:
AT5G07100, AT1G62300, AT5G22570, AT4G36920, AT2G46130, AT4G31550

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


78 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, ERF104 ox, water 4 hCol, ERF104 ox, Flg22 4 h2.112.84E-02
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h2.061.87E-02
GSE12856Col, WT, controlCol, WT, Bg h2.841.05E-08
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.363.93E-08
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d1.543.65E-07
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-4.592.88E-19
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-4.641.72E-19
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.944.63E-13
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h1.798.36E-13
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h1.981.89E-13
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d1.686.89E-04
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.513.95E-04
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h1.648.96E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h1.679.27E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.847.19E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h1.695.48E-04
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d1.543.19E-02
GSE37921Col, WT, controlCol, WT, CMV2.293.71E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.531.40E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV3.061.43E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.571.21E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.435.58E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h4.352.46E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.351.18E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h4.541.97E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.971.01E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h5.904.81E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h4.914.10E-13
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h5.992.19E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.752.54E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h4.941.53E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h6.311.51E-12
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h6.636.12E-08
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h2.996.77E-06
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h3.157.42E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h2.652.04E-05
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.313.28E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h2.701.35E-02
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.623.13E-05
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.851.62E-10
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h3.113.66E-12
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.511.22E-04
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h2.219.64E-07
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h2.662.36E-09
GSE56094Col, WT, control 2 hCol, WT, hrpA- 2 h1.808.99E-05
GSE56094Col, WT, control 3 hCol, WT, PstDC3000 3 h1.626.51E-04
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h2.862.26E-10
GSE56094Col, WT, control 4 hCol, WT, hrpA- 4 h2.032.20E-05
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h2.216.17E-07
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h2.462.79E-08
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h3.058.60E-12
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h3.391.71E-13
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h1.972.98E-06
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h2.176.20E-07
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.044.50E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h2.822.86E-10
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.605.03E-10
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h3.012.51E-11
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h2.111.05E-06
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h2.119.06E-07
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h2.256.19E-08
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.408.57E-09
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h2.642.14E-05
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h2.201.31E-04
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h3.258.95E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h4.972.21E-02
GSE62537Col, WT, control 48 hCol, WT, V.longisporum 48 h2.613.54E-04
GSE62537Col, ndr1, control 48 hCol, ndr1, V.longisporum 48 h3.682.92E-05
GSE6556Col, WT, controlCol, WT, PstDC3000 AvrRpt2 48 h2.685.28E-04
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.698.05E-05
GSE73351Ws-4, WT, controlWs-4, WT, H.ara Emwa1 3 d2.942.99E-02
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.832.34E-10
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h7.924.61E-07
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h7.601.16E-06
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min7.069.69E-07
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h6.342.60E-06
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h5.918.06E-06
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min5.751.16E-06






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.