co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G43620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:0032497: detection of lipopolysaccharide	0.00E+00
3	GO:0010200: response to chitin	5.18E-06
4	GO:0009626: plant-type hypersensitive response	5.07E-05
5	GO:0010365: positive regulation of ethylene biosynthetic process	1.14E-04
6	GO:0051245: negative regulation of cellular defense response	1.14E-04
7	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.14E-04
8	GO:0010941: regulation of cell death	1.14E-04
9	GO:0010045: response to nickel cation	1.14E-04
10	GO:0051180: vitamin transport	1.14E-04
11	GO:0030974: thiamine pyrophosphate transport	1.14E-04
12	GO:0043069: negative regulation of programmed cell death	1.55E-04
13	GO:0010042: response to manganese ion	2.65E-04
14	GO:0002221: pattern recognition receptor signaling pathway	2.65E-04
15	GO:0015893: drug transport	2.65E-04
16	GO:0002237: response to molecule of bacterial origin	2.74E-04
17	GO:0070588: calcium ion transmembrane transport	3.08E-04
18	GO:0009062: fatty acid catabolic process	4.38E-04
19	GO:0051176: positive regulation of sulfur metabolic process	4.38E-04
20	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	4.38E-04
21	GO:0010581: regulation of starch biosynthetic process	4.38E-04
22	GO:0002230: positive regulation of defense response to virus by host	4.38E-04
23	GO:0015696: ammonium transport	6.29E-04
24	GO:0000187: activation of MAPK activity	6.29E-04
25	GO:0046713: borate transport	6.29E-04
26	GO:0006612: protein targeting to membrane	6.29E-04
27	GO:0050832: defense response to fungus	8.25E-04
28	GO:0080142: regulation of salicylic acid biosynthetic process	8.35E-04
29	GO:0046345: abscisic acid catabolic process	8.35E-04
30	GO:0072488: ammonium transmembrane transport	8.35E-04
31	GO:0010363: regulation of plant-type hypersensitive response	8.35E-04
32	GO:0010508: positive regulation of autophagy	8.35E-04
33	GO:0006891: intra-Golgi vesicle-mediated transport	9.17E-04
34	GO:0016032: viral process	9.77E-04
35	GO:0051607: defense response to virus	1.23E-03
36	GO:0042742: defense response to bacterium	1.45E-03
37	GO:2000037: regulation of stomatal complex patterning	1.54E-03
38	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.54E-03
39	GO:0008219: cell death	1.69E-03
40	GO:0010038: response to metal ion	1.81E-03
41	GO:1900056: negative regulation of leaf senescence	1.81E-03
42	GO:0010099: regulation of photomorphogenesis	2.39E-03
43	GO:0071482: cellular response to light stimulus	2.39E-03
44	GO:0051865: protein autoubiquitination	2.70E-03
45	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.36E-03
46	GO:0007064: mitotic sister chromatid cohesion	3.36E-03
47	GO:0009909: regulation of flower development	4.06E-03
48	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	4.06E-03
49	GO:0008361: regulation of cell size	4.06E-03
50	GO:0010229: inflorescence development	4.43E-03
51	GO:0009718: anthocyanin-containing compound biosynthetic process	4.43E-03
52	GO:0009785: blue light signaling pathway	4.43E-03
53	GO:0007034: vacuolar transport	4.81E-03
54	GO:0034605: cellular response to heat	4.81E-03
55	GO:0042343: indole glucosinolate metabolic process	5.21E-03
56	GO:0009863: salicylic acid mediated signaling pathway	6.03E-03
57	GO:0006468: protein phosphorylation	6.60E-03
58	GO:0098542: defense response to other organism	6.89E-03
59	GO:0048278: vesicle docking	6.89E-03
60	GO:0031408: oxylipin biosynthetic process	6.89E-03
61	GO:0071456: cellular response to hypoxia	7.34E-03
62	GO:0010017: red or far-red light signaling pathway	7.34E-03
63	GO:0009814: defense response, incompatible interaction	7.34E-03
64	GO:0016226: iron-sulfur cluster assembly	7.34E-03
65	GO:0001944: vasculature development	7.79E-03
66	GO:0010227: floral organ abscission	7.79E-03
67	GO:0042147: retrograde transport, endosome to Golgi	8.74E-03
68	GO:0070417: cellular response to cold	8.74E-03
69	GO:0000271: polysaccharide biosynthetic process	9.23E-03
70	GO:0042391: regulation of membrane potential	9.23E-03
71	GO:0045489: pectin biosynthetic process	9.73E-03
72	GO:0071472: cellular response to salt stress	9.73E-03
73	GO:0048544: recognition of pollen	1.02E-02
74	GO:0061025: membrane fusion	1.02E-02
75	GO:0007166: cell surface receptor signaling pathway	1.03E-02
76	GO:0009617: response to bacterium	1.08E-02
77	GO:0006635: fatty acid beta-oxidation	1.13E-02
78	GO:0002229: defense response to oomycetes	1.13E-02
79	GO:0010193: response to ozone	1.13E-02
80	GO:0001666: response to hypoxia	1.46E-02
81	GO:0009615: response to virus	1.46E-02
82	GO:0009911: positive regulation of flower development	1.46E-02
83	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.52E-02
84	GO:0009816: defense response to bacterium, incompatible interaction	1.52E-02
85	GO:0006906: vesicle fusion	1.58E-02
86	GO:0048573: photoperiodism, flowering	1.64E-02
87	GO:0016049: cell growth	1.70E-02
88	GO:0080167: response to karrikin	1.74E-02
89	GO:0046777: protein autophosphorylation	1.86E-02
90	GO:0044550: secondary metabolite biosynthetic process	1.89E-02
91	GO:0006499: N-terminal protein myristoylation	1.89E-02
92	GO:0010043: response to zinc ion	1.96E-02
93	GO:0007568: aging	1.96E-02
94	GO:0016051: carbohydrate biosynthetic process	2.09E-02
95	GO:0009867: jasmonic acid mediated signaling pathway	2.09E-02
96	GO:0045087: innate immune response	2.09E-02
97	GO:0045892: negative regulation of transcription, DNA-templated	2.11E-02
98	GO:0006886: intracellular protein transport	2.14E-02
99	GO:0006839: mitochondrial transport	2.29E-02
100	GO:0006887: exocytosis	2.36E-02
101	GO:0009744: response to sucrose	2.50E-02
102	GO:0009640: photomorphogenesis	2.50E-02
103	GO:0009751: response to salicylic acid	2.53E-02
104	GO:0000209: protein polyubiquitination	2.57E-02
105	GO:0000165: MAPK cascade	2.87E-02
106	GO:0031347: regulation of defense response	2.87E-02
107	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.87E-02
108	GO:0042538: hyperosmotic salinity response	2.94E-02
109	GO:0016567: protein ubiquitination	3.23E-02
110	GO:0009873: ethylene-activated signaling pathway	3.31E-02
111	GO:0009409: response to cold	3.58E-02
112	GO:0009620: response to fungus	3.73E-02
113	GO:0009624: response to nematode	3.98E-02
114	GO:0009742: brassinosteroid mediated signaling pathway	4.14E-02
115	GO:0009738: abscisic acid-activated signaling pathway	4.38E-02
116	GO:0009611: response to wounding	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0008809: carnitine racemase activity	1.14E-04
2	GO:0090422: thiamine pyrophosphate transporter activity	1.14E-04
3	GO:0015085: calcium ion transmembrane transporter activity	1.14E-04
4	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.14E-04
5	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.14E-04
6	GO:0005388: calcium-transporting ATPase activity	2.41E-04
7	GO:0080041: ADP-ribose pyrophosphohydrolase activity	2.65E-04
8	GO:0017110: nucleoside-diphosphatase activity	2.65E-04
9	GO:0033897: ribonuclease T2 activity	4.38E-04
10	GO:0004165: dodecenoyl-CoA delta-isomerase activity	6.29E-04
11	GO:0016301: kinase activity	7.95E-04
12	GO:0047631: ADP-ribose diphosphatase activity	1.05E-03
13	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.05E-03
14	GO:0010294: abscisic acid glucosyltransferase activity	1.05E-03
15	GO:0008519: ammonium transmembrane transporter activity	1.29E-03
16	GO:0000210: NAD+ diphosphatase activity	1.29E-03
17	GO:0004620: phospholipase activity	1.81E-03
18	GO:0004708: MAP kinase kinase activity	2.09E-03
19	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.09E-03
20	GO:0008047: enzyme activator activity	3.36E-03
21	GO:0047372: acylglycerol lipase activity	3.71E-03
22	GO:0004521: endoribonuclease activity	4.06E-03
23	GO:0008234: cysteine-type peptidase activity	4.06E-03
24	GO:0030552: cAMP binding	5.21E-03
25	GO:0030553: cGMP binding	5.21E-03
26	GO:0043424: protein histidine kinase binding	6.45E-03
27	GO:0005216: ion channel activity	6.45E-03
28	GO:0008270: zinc ion binding	6.46E-03
29	GO:0033612: receptor serine/threonine kinase binding	6.89E-03
30	GO:0004540: ribonuclease activity	6.89E-03
31	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	7.34E-03
32	GO:0004674: protein serine/threonine kinase activity	7.74E-03
33	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.39E-03
34	GO:0005249: voltage-gated potassium channel activity	9.23E-03
35	GO:0030551: cyclic nucleotide binding	9.23E-03
36	GO:0003713: transcription coactivator activity	9.73E-03
37	GO:0004842: ubiquitin-protein transferase activity	9.97E-03
38	GO:0004672: protein kinase activity	1.09E-02
39	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.35E-02
40	GO:0043531: ADP binding	1.53E-02
41	GO:0019825: oxygen binding	1.57E-02
42	GO:0008375: acetylglucosaminyltransferase activity	1.58E-02
43	GO:0005516: calmodulin binding	1.69E-02
44	GO:0000149: SNARE binding	2.22E-02
45	GO:0005509: calcium ion binding	2.22E-02
46	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.25E-02
47	GO:0005506: iron ion binding	2.41E-02
48	GO:0043565: sequence-specific DNA binding	2.46E-02
49	GO:0005484: SNAP receptor activity	2.50E-02
50	GO:0003924: GTPase activity	2.56E-02
51	GO:0051287: NAD binding	2.87E-02
52	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.09E-02
53	GO:0016298: lipase activity	3.17E-02
54	GO:0031625: ubiquitin protein ligase binding	3.33E-02
55	GO:0045735: nutrient reservoir activity	3.49E-02
56	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.73E-02
57	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.73E-02
58	GO:0016757: transferase activity, transferring glycosyl groups	3.80E-02
59	GO:0020037: heme binding	4.31E-02
60	GO:0005515: protein binding	4.38E-02
61	GO:0016758: transferase activity, transferring hexosyl groups	4.58E-02
62	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.63E-02
63	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0005901: caveola	2.65E-04
2	GO:0090404: pollen tube tip	3.71E-03
3	GO:0012505: endomembrane system	5.06E-03
4	GO:0005795: Golgi stack	5.21E-03
5	GO:0043234: protein complex	5.61E-03
6	GO:0005887: integral component of plasma membrane	7.15E-03
7	GO:0005886: plasma membrane	8.38E-03
8	GO:0031201: SNARE complex	2.36E-02
9	GO:0090406: pollen tube	2.50E-02
10	GO:0016021: integral component of membrane	2.77E-02
11	GO:0043231: intracellular membrane-bounded organelle	2.83E-02
12	GO:0010008: endosome membrane	3.57E-02