gene detail

Gene description

TAIR ID: AT2G43290

Short description: Calcium-binding EF-hand family protein

Pathogen responsiveness: -0.62

General responsiveness: 0.14

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

GO biological process

biological_process

GO cellular component

extracellular region, endomembrane system

GO molecular function

calcium ion binding

Protein domain

Pfam	PF13499, EF-hand domain pair
SMART	SM00054, EFh

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

Coexpression network

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	1.60	7.59E-05
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	1.58	9.22E-05
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	1.58	3.55E-05
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-1.75	1.22E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.51	1.13E-06
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.79	7.33E-03
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	2.05	2.79E-05