gene detail

Gene description

TAIR ID: AT2G43120

Short description: RmlC-like cupins superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

defense response to bacterium

GO cellular component

nucleus, plasma membrane, cytosol

GO molecular function

protein binding, metal ion binding, peptidase inhibitor activity

Protein domain

Pfam	PF05726, Pirin C-terminal cupin domain
Pfam	PF02678, Pirin

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view

Differentially expressed condition

5 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.44	3.25E-09
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	1.96	6.73E-08
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	1.70	1.99E-06
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.63	2.78E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.15	6.13E-07

Showing 1 to 5 of 5 entries