Gene: AT2G42810
     

Gene description


TAIR ID: AT2G42810

Short description: protein phosphatase 5.2

Pathogen responsiveness: -1.59

General responsiveness: -2.91

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G126435  

Wheat: No orthologous gene

GO biological process


response to cadmium ion, negative regulation of chlorophyll biosynthetic process, protein dephosphorylation, red or far-red light signaling pathway, tetrapyrrole binding, nucleocytoplasmic transport


GO cellular component


plasmodesma, cytosol, integral component of endoplasmic reticulum membrane, nucleus, nuclear membrane, nuclear speck, cytoplasm, nuclear envelope


GO molecular function


chloroplast-nucleus signaling pathway, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity, metal ion binding


Protein domain


PfamPF08321, PPP5 TPR repeat region
PfamPF00149, Calcineurin-like phosphoesterase
PfamPF00515, Tetratricopeptide repeat
PfamPF13431, Tetratricopeptide repeat
SMARTSM00156, PP2Ac
SMARTSM00028, TPR

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT4G18770, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.563.96E-02
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.321.06E-14
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h1.581.60E-07
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h1.682.62E-08
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.712.69E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.256.55E-14
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.781.76E-09
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h1.611.24E-07






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