gene detail

Gene description

TAIR ID: AT2G42780

No short description

Pathogen responsiveness: -1.56

General responsiveness: -2.85

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, translational elongation

GO cellular component

nucleus, integral component of membrane

GO molecular function

translation elongation factor activity

Protein domain

Pfam	PF06881, RNA polymerase II transcription factor SIII (Elongin) subunit A

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G13450, AT2G20180, AT5G41315, AT4G31800

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.67	3.72E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.63	4.58E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.76	1.36E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.86	3.45E-08