Gene: AT2G42620
     


Gene description


TAIR ID: AT2G42620

Short description: RNI-like superfamily protein

Pathogen responsiveness: -1.47

General responsiveness: -1.96

Orthologous


Rice:

OS06G0154200  

Maize:

GRMZM2G405203  

Wheat: No orthologous gene

GO biological process


auxin-activated signaling pathway, ubiquitin-dependent protein catabolic process, protein ubiquitination, positive regulation of response to water deprivation, regulation of meristem structural organization, shoot system morphogenesis, cuticle development, response to water deprivation, response to light stimulus, auxin polar transport, aging, negative regulation of seed germination


GO cellular component


ubiquitin ligase complex, nucleus


GO molecular function


ubiquitin-protein transferase activity, protein binding


Protein domain


SMARTSM00367, LRR_CC

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G23810, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-1.602.60E-03
GSE17464Penta, controlPenta, Flg22 2 h-2.158.08E-06
GSE17464Penta, controlPenta, Flg22 2 h-1.549.77E-04
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.053.24E-03






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