Gene: AT2G42160
     

Gene description


TAIR ID: AT2G42160

Short description: zinc finger (ubiquitin-hydrolase) domain-containing protein

Pathogen responsiveness: -2.46

General responsiveness: -2.09

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G066169  

Wheat: No orthologous gene

GO biological process


regulation of seed germination


GO cellular component


cytoplasm


GO molecular function


ubiquitin-protein transferase activity, protein heterodimerization activity, catalytic activity


Protein domain


PfamPF02148, Zn-finger in ubiquitin-hydrolases and other protein
PfamPF07576, BRCA1-associated protein 2
SMARTSM00290, ZnF_UBP

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G18770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.611.09E-07






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.