gene detail

Gene description

TAIR ID: AT2G41560

Short description: autoinhibited Ca(2+)-ATPase, isoform 4

Pathogen responsiveness: -0.37

General responsiveness: -0.03

Orthologous

Rice:

OS12G0136900

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to salt stress, calcium ion transmembrane transport, anion homeostasis, defense response to bacterium, response to osmotic stress, negative regulation of programmed cell death, response to nematode

GO cellular component

vacuolar membrane, plant-type vacuole membrane, integral component of membrane, plant-type vacuole, vacuole, chloroplast, integral component of plasma membrane

GO molecular function

calcium-transporting ATPase activity, metal ion binding, ATP binding

Protein domain

Pfam	PF12515, Ca2+-ATPase N terminal autoinhibitory domain
Pfam	PF00689, Cation transporting ATPase, C-terminus
Pfam	PF00702, haloacid dehalogenase-like hydrolase
Pfam	PF00690, Cation transporter/ATPase, N-terminus
Pfam	PF00122, E1-E2 ATPase
SMART	SM00831, Cation_ATPase_N

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE26679_EDR1_GC  view

Differentially expressed condition

19 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	-1.53	9.39E-08
GSE17464	Laer, control	Laer, Flg22 2 h	-1.58	1.93E-03
GSE17464	Penta, control	Penta, Flg22 2 h	-2.32	1.51E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.15	9.85E-08
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.69	5.93E-08
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.84	2.46E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.69	9.21E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.64	1.59E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.80	1.72E-10
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.64	4.03E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.56	3.92E-02
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.75	5.38E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.63	3.16E-02
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.75	5.03E-05
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.88	1.45E-11
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.57	7.66E-09
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.59	4.24E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.56	1.27E-06
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-2.10	2.19E-03