Gene: AT2G41240
     


Gene description


TAIR ID: AT2G41240

Short description: basic helix-loop-helix protein 100

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G057413  

Wheat:

TAAFFX.56618.1.A1_AT  TA.5544.1.A1_AT  


GO biological process


cellular response to iron ion starvation, response to water deprivation, regulation of transcription from RNA polymerase II promoter, regulation of transcription, DNA-templated, transcription, iron ion homeostasis


GO cellular component


nucleus, RNA polymerase II transcription factor complex


GO molecular function


protein dimerization activity, RNA polymerase II regulatory region sequence-specific DNA binding, transcription factor activity, sequence-specific DNA binding, protein binding


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G38250, AT2G20180, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Di2, WT, controlDi2, WT, TEV 21 d3.371.34E-04
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d3.486.91E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.682.69E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.376.64E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.161.25E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-2.122.69E-02






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