Gene: AT2G41100
     

Gene description


TAIR ID: AT2G41100

Short description: Calcium-binding EF hand family protein

Pathogen responsiveness: 1.34

General responsiveness: 1.67

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to absence of light, response to temperature stimulus, thigmotropism, response to mechanical stimulus


GO cellular component


vacuolar membrane, mitochondrion, plasmodesma


GO molecular function


calcium ion binding, protein binding


Protein domain


PfamPF13499, EF-hand domain pair
PfamPF00036, EF hand
PfamPF13833, EF-hand domain pair
SMARTSM00054, EFh

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G11260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 89 (Top5%)

click to view PPI network

Differentially expressed condition


45 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.664.19E-09
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.806.07E-06
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d2.702.45E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-1.527.08E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.311.24E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h3.234.34E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.417.48E-05
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h2.091.30E-11
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h1.568.89E-10
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.626.70E-08
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.692.85E-06
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.536.46E-06
GSE37921Col, WT, controlCol, WT, CMV1.655.81E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h4.043.94E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.931.47E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h3.841.08E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.982.25E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.277.84E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.031.50E-13
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.913.38E-13
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.974.51E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h5.083.81E-15
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h4.053.43E-13
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.813.32E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.273.03E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h3.089.96E-11
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h3.088.16E-11
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.683.69E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.761.92E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.184.86E-09
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h1.721.71E-05
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.572.70E-05
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.744.09E-08
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h1.983.00E-05
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h1.685.53E-05
GSE5686Col, WT, control 5 dCol, WT, G.orontii 5 d1.736.33E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.568.61E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.423.62E-06
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d2.903.40E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.854.49E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h3.274.97E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min2.127.68E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h2.412.05E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.761.85E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min1.611.25E-03






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