Gene: AT2G40340
     

Gene description


TAIR ID: AT2G40340

Short description: Integrase-type DNA-binding superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


positive regulation of transcription, DNA-templated, response to abscisic acid, regulation of transcription, heat acclimation, abscisic acid-activated signaling pathway, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, transcription regulatory region DNA binding


Protein domain


PfamPF00847, AP2 domain
SMARTSM00380, AP2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G11260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


12 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.216.28E-07
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.824.87E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.912.61E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.783.93E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h4.468.70E-17
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.172.66E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.966.33E-09
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.059.18E-09
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h1.661.00E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.222.26E-05
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.553.71E-03
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.042.19E-04






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