GO Enrichment Analysis of Co-expressed Genes with
AT2G40340
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009560: embryo sac egg cell differentiation | 0.00E+00 |
| 2 | GO:0006778: porphyrin-containing compound metabolic process | 0.00E+00 |
| 3 | GO:2000070: regulation of response to water deprivation | 3.06E-05 |
| 4 | GO:0009873: ethylene-activated signaling pathway | 5.31E-05 |
| 5 | GO:1902039: negative regulation of seed dormancy process | 6.74E-05 |
| 6 | GO:0034628: 'de novo' NAD biosynthetic process from aspartate | 6.74E-05 |
| 7 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 9.94E-05 |
| 8 | GO:0080148: negative regulation of response to water deprivation | 1.62E-04 |
| 9 | GO:0044419: interspecies interaction between organisms | 1.62E-04 |
| 10 | GO:0048838: release of seed from dormancy | 1.62E-04 |
| 11 | GO:0006081: cellular aldehyde metabolic process | 2.75E-04 |
| 12 | GO:0010366: negative regulation of ethylene biosynthetic process | 2.75E-04 |
| 13 | GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 2.75E-04 |
| 14 | GO:0046168: glycerol-3-phosphate catabolic process | 2.75E-04 |
| 15 | GO:0080168: abscisic acid transport | 2.75E-04 |
| 16 | GO:0051176: positive regulation of sulfur metabolic process | 2.75E-04 |
| 17 | GO:0009737: response to abscisic acid | 3.58E-04 |
| 18 | GO:0009413: response to flooding | 3.98E-04 |
| 19 | GO:0006072: glycerol-3-phosphate metabolic process | 3.98E-04 |
| 20 | GO:0009939: positive regulation of gibberellic acid mediated signaling pathway | 5.32E-04 |
| 21 | GO:0001709: cell fate determination | 5.32E-04 |
| 22 | GO:0009435: NAD biosynthetic process | 6.73E-04 |
| 23 | GO:0045487: gibberellin catabolic process | 6.73E-04 |
| 24 | GO:0030041: actin filament polymerization | 6.73E-04 |
| 25 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 7.08E-04 |
| 26 | GO:0048317: seed morphogenesis | 8.23E-04 |
| 27 | GO:0006796: phosphate-containing compound metabolic process | 8.23E-04 |
| 28 | GO:0006014: D-ribose metabolic process | 8.23E-04 |
| 29 | GO:0006970: response to osmotic stress | 1.03E-03 |
| 30 | GO:0006401: RNA catabolic process | 1.14E-03 |
| 31 | GO:0071669: plant-type cell wall organization or biogenesis | 1.14E-03 |
| 32 | GO:0045010: actin nucleation | 1.32E-03 |
| 33 | GO:0009850: auxin metabolic process | 1.32E-03 |
| 34 | GO:0009690: cytokinin metabolic process | 1.32E-03 |
| 35 | GO:0009415: response to water | 1.32E-03 |
| 36 | GO:0051707: response to other organism | 1.38E-03 |
| 37 | GO:0010208: pollen wall assembly | 1.50E-03 |
| 38 | GO:0048193: Golgi vesicle transport | 1.50E-03 |
| 39 | GO:0009060: aerobic respiration | 1.69E-03 |
| 40 | GO:0010345: suberin biosynthetic process | 1.69E-03 |
| 41 | GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 1.69E-03 |
| 42 | GO:0006364: rRNA processing | 1.85E-03 |
| 43 | GO:0008202: steroid metabolic process | 1.89E-03 |
| 44 | GO:0009408: response to heat | 1.99E-03 |
| 45 | GO:0010015: root morphogenesis | 2.31E-03 |
| 46 | GO:0006820: anion transport | 2.53E-03 |
| 47 | GO:0000398: mRNA splicing, via spliceosome | 3.00E-03 |
| 48 | GO:0010030: positive regulation of seed germination | 3.23E-03 |
| 49 | GO:0042753: positive regulation of circadian rhythm | 3.48E-03 |
| 50 | GO:0043622: cortical microtubule organization | 3.99E-03 |
| 51 | GO:0006633: fatty acid biosynthetic process | 4.08E-03 |
| 52 | GO:0046686: response to cadmium ion | 4.09E-03 |
| 53 | GO:0009269: response to desiccation | 4.26E-03 |
| 54 | GO:0007623: circadian rhythm | 4.48E-03 |
| 55 | GO:0016226: iron-sulfur cluster assembly | 4.53E-03 |
| 56 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.53E-03 |
| 57 | GO:0009686: gibberellin biosynthetic process | 4.81E-03 |
| 58 | GO:0006470: protein dephosphorylation | 5.11E-03 |
| 59 | GO:0010501: RNA secondary structure unwinding | 5.68E-03 |
| 60 | GO:0000271: polysaccharide biosynthetic process | 5.68E-03 |
| 61 | GO:0009960: endosperm development | 5.98E-03 |
| 62 | GO:0006814: sodium ion transport | 6.28E-03 |
| 63 | GO:0042752: regulation of circadian rhythm | 6.28E-03 |
| 64 | GO:0009749: response to glucose | 6.60E-03 |
| 65 | GO:0019252: starch biosynthetic process | 6.60E-03 |
| 66 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 6.91E-03 |
| 67 | GO:0009639: response to red or far red light | 7.90E-03 |
| 68 | GO:0010286: heat acclimation | 8.24E-03 |
| 69 | GO:0071805: potassium ion transmembrane transport | 8.24E-03 |
| 70 | GO:0007267: cell-cell signaling | 8.24E-03 |
| 71 | GO:0080167: response to karrikin | 8.57E-03 |
| 72 | GO:0009615: response to virus | 8.93E-03 |
| 73 | GO:0010029: regulation of seed germination | 9.29E-03 |
| 74 | GO:0009414: response to water deprivation | 9.77E-03 |
| 75 | GO:0030244: cellulose biosynthetic process | 1.08E-02 |
| 76 | GO:0010311: lateral root formation | 1.11E-02 |
| 77 | GO:0009832: plant-type cell wall biogenesis | 1.11E-02 |
| 78 | GO:0009631: cold acclimation | 1.19E-02 |
| 79 | GO:0016051: carbohydrate biosynthetic process | 1.27E-02 |
| 80 | GO:0042542: response to hydrogen peroxide | 1.48E-02 |
| 81 | GO:0009644: response to high light intensity | 1.61E-02 |
| 82 | GO:0009636: response to toxic substance | 1.65E-02 |
| 83 | GO:0006855: drug transmembrane transport | 1.70E-02 |
| 84 | GO:0005975: carbohydrate metabolic process | 1.71E-02 |
| 85 | GO:0009846: pollen germination | 1.79E-02 |
| 86 | GO:0006812: cation transport | 1.79E-02 |
| 87 | GO:0006813: potassium ion transport | 1.88E-02 |
| 88 | GO:0010224: response to UV-B | 1.93E-02 |
| 89 | GO:0009738: abscisic acid-activated signaling pathway | 2.18E-02 |
| 90 | GO:0009611: response to wounding | 2.31E-02 |
| 91 | GO:0009553: embryo sac development | 2.37E-02 |
| 92 | GO:0009624: response to nematode | 2.42E-02 |
| 93 | GO:0006457: protein folding | 2.92E-02 |
| 94 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.68E-02 |
| 95 | GO:0050832: defense response to fungus | 3.95E-02 |
| 96 | GO:0010468: regulation of gene expression | 4.04E-02 |
| 97 | GO:0071555: cell wall organization | 4.55E-02 |
| 98 | GO:0009651: response to salt stress | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030621: U4 snRNA binding | 0.00E+00 |
| 2 | GO:0008987: quinolinate synthetase A activity | 0.00E+00 |
| 3 | GO:0033721: aldehyde dehydrogenase (NADP+) activity | 0.00E+00 |
| 4 | GO:0030544: Hsp70 protein binding | 6.74E-05 |
| 5 | GO:0090440: abscisic acid transporter activity | 6.74E-05 |
| 6 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 2.75E-04 |
| 7 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 2.75E-04 |
| 8 | GO:0051740: ethylene binding | 3.98E-04 |
| 9 | GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity | 3.98E-04 |
| 10 | GO:0005432: calcium:sodium antiporter activity | 3.98E-04 |
| 11 | GO:0004715: non-membrane spanning protein tyrosine kinase activity | 3.98E-04 |
| 12 | GO:0002020: protease binding | 6.73E-04 |
| 13 | GO:0017070: U6 snRNA binding | 6.73E-04 |
| 14 | GO:0008381: mechanically-gated ion channel activity | 6.73E-04 |
| 15 | GO:0009922: fatty acid elongase activity | 6.73E-04 |
| 16 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 8.23E-04 |
| 17 | GO:0004747: ribokinase activity | 9.79E-04 |
| 18 | GO:0051753: mannan synthase activity | 9.79E-04 |
| 19 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 1.14E-03 |
| 20 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 1.14E-03 |
| 21 | GO:0004427: inorganic diphosphatase activity | 1.14E-03 |
| 22 | GO:0004564: beta-fructofuranosidase activity | 1.32E-03 |
| 23 | GO:0008865: fructokinase activity | 1.32E-03 |
| 24 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 1.32E-03 |
| 25 | GO:0015491: cation:cation antiporter activity | 1.32E-03 |
| 26 | GO:0008142: oxysterol binding | 1.50E-03 |
| 27 | GO:0005267: potassium channel activity | 1.50E-03 |
| 28 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.89E-03 |
| 29 | GO:0004575: sucrose alpha-glucosidase activity | 1.89E-03 |
| 30 | GO:0008047: enzyme activator activity | 2.10E-03 |
| 31 | GO:0004713: protein tyrosine kinase activity | 2.10E-03 |
| 32 | GO:0004673: protein histidine kinase activity | 2.10E-03 |
| 33 | GO:0000155: phosphorelay sensor kinase activity | 2.76E-03 |
| 34 | GO:0000175: 3'-5'-exoribonuclease activity | 2.76E-03 |
| 35 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 3.48E-03 |
| 36 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 3.48E-03 |
| 37 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 3.48E-03 |
| 38 | GO:0035251: UDP-glucosyltransferase activity | 4.26E-03 |
| 39 | GO:0004540: ribonuclease activity | 4.26E-03 |
| 40 | GO:0015297: antiporter activity | 4.28E-03 |
| 41 | GO:0016760: cellulose synthase (UDP-forming) activity | 4.81E-03 |
| 42 | GO:0019901: protein kinase binding | 6.60E-03 |
| 43 | GO:0004872: receptor activity | 6.60E-03 |
| 44 | GO:0016759: cellulose synthase activity | 7.90E-03 |
| 45 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 8.24E-03 |
| 46 | GO:0004004: ATP-dependent RNA helicase activity | 1.00E-02 |
| 47 | GO:0015238: drug transmembrane transporter activity | 1.11E-02 |
| 48 | GO:0004722: protein serine/threonine phosphatase activity | 1.13E-02 |
| 49 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.19E-02 |
| 50 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.39E-02 |
| 51 | GO:0035091: phosphatidylinositol binding | 1.61E-02 |
| 52 | GO:0051287: NAD binding | 1.74E-02 |
| 53 | GO:0016887: ATPase activity | 1.97E-02 |
| 54 | GO:0031625: ubiquitin protein ligase binding | 2.02E-02 |
| 55 | GO:0016301: kinase activity | 2.07E-02 |
| 56 | GO:0005524: ATP binding | 2.17E-02 |
| 57 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.26E-02 |
| 58 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.26E-02 |
| 59 | GO:0000166: nucleotide binding | 2.26E-02 |
| 60 | GO:0016874: ligase activity | 2.31E-02 |
| 61 | GO:0003779: actin binding | 2.37E-02 |
| 62 | GO:0016758: transferase activity, transferring hexosyl groups | 2.78E-02 |
| 63 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.98E-02 |
| 64 | GO:0004252: serine-type endopeptidase activity | 3.05E-02 |
| 65 | GO:0008194: UDP-glycosyltransferase activity | 3.86E-02 |
| 66 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.23E-02 |
| 67 | GO:0000287: magnesium ion binding | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031225: anchored component of membrane | 2.56E-04 |
| 2 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 3.98E-04 |
| 3 | GO:0005778: peroxisomal membrane | 6.01E-04 |
| 4 | GO:0000178: exosome (RNase complex) | 6.73E-04 |
| 5 | GO:0016363: nuclear matrix | 9.79E-04 |
| 6 | GO:0005886: plasma membrane | 1.22E-03 |
| 7 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 1.50E-03 |
| 8 | GO:0071013: catalytic step 2 spliceosome | 2.31E-03 |
| 9 | GO:0005795: Golgi stack | 3.23E-03 |
| 10 | GO:0005770: late endosome | 5.98E-03 |
| 11 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 7.58E-03 |
| 12 | GO:0000932: P-body | 8.93E-03 |
| 13 | GO:0019005: SCF ubiquitin ligase complex | 1.08E-02 |
| 14 | GO:0031902: late endosome membrane | 1.44E-02 |
| 15 | GO:0005829: cytosol | 2.02E-02 |
| 16 | GO:0005681: spliceosomal complex | 2.12E-02 |
| 17 | GO:0010008: endosome membrane | 2.17E-02 |
| 18 | GO:0016607: nuclear speck | 2.17E-02 |
| 19 | GO:0009524: phragmoplast | 2.94E-02 |
| 20 | GO:0005783: endoplasmic reticulum | 3.86E-02 |
| 21 | GO:0016021: integral component of membrane | 3.95E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 4.35E-02 |