gene detail

Gene description

TAIR ID: AT2G38340

Short description: Integrase-type DNA-binding superfamily protein

Pathogen responsiveness: 0.78

General responsiveness: 0.71

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

transcription, DNA-templated, positive regulation of transcription, cellular response to heat, response to water deprivation, response to salt stress, regulation of transcription, abscisic acid-activated signaling pathway

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00847, AP2 domain
SMART	SM00380, AP2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT5G41315

Target:
AT4G28370, AT2G34710, AT1G75410, AT5G60690

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

37 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.91	4.03E-09
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	3.88	4.89E-08
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	3.74	2.45E-05
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	3.74	3.64E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	3.66	7.62E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	3.64	7.62E-14
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	3.49	1.50E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	3.08	8.28E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.90	2.17E-12
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.88	4.80E-03

Showing 1 to 10 of 37 entries

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