GO Enrichment Analysis of Co-expressed Genes with
AT2G38340
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006654: phosphatidic acid biosynthetic process | 0.00E+00 |
| 2 | GO:0097250: mitochondrial respiratory chain supercomplex assembly | 0.00E+00 |
| 3 | GO:0007275: multicellular organism development | 5.52E-05 |
| 4 | GO:0043609: regulation of carbon utilization | 6.91E-05 |
| 5 | GO:1903648: positive regulation of chlorophyll catabolic process | 6.91E-05 |
| 6 | GO:0000077: DNA damage checkpoint | 6.91E-05 |
| 7 | GO:0042350: GDP-L-fucose biosynthetic process | 6.91E-05 |
| 8 | GO:1990641: response to iron ion starvation | 6.91E-05 |
| 9 | GO:0006101: citrate metabolic process | 1.66E-04 |
| 10 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 1.66E-04 |
| 11 | GO:0006597: spermine biosynthetic process | 1.66E-04 |
| 12 | GO:0031538: negative regulation of anthocyanin metabolic process | 1.66E-04 |
| 13 | GO:0042853: L-alanine catabolic process | 1.66E-04 |
| 14 | GO:0040020: regulation of meiotic nuclear division | 1.66E-04 |
| 15 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 2.81E-04 |
| 16 | GO:0010253: UDP-rhamnose biosynthetic process | 2.81E-04 |
| 17 | GO:0009226: nucleotide-sugar biosynthetic process | 4.06E-04 |
| 18 | GO:0043967: histone H4 acetylation | 4.06E-04 |
| 19 | GO:0055070: copper ion homeostasis | 4.06E-04 |
| 20 | GO:0055089: fatty acid homeostasis | 4.06E-04 |
| 21 | GO:0051639: actin filament network formation | 4.06E-04 |
| 22 | GO:0071329: cellular response to sucrose stimulus | 4.06E-04 |
| 23 | GO:0009165: nucleotide biosynthetic process | 5.42E-04 |
| 24 | GO:0051764: actin crosslink formation | 5.42E-04 |
| 25 | GO:0006097: glyoxylate cycle | 6.87E-04 |
| 26 | GO:0009738: abscisic acid-activated signaling pathway | 7.24E-04 |
| 27 | GO:0006596: polyamine biosynthetic process | 8.40E-04 |
| 28 | GO:0010315: auxin efflux | 8.40E-04 |
| 29 | GO:0043966: histone H3 acetylation | 9.99E-04 |
| 30 | GO:1900057: positive regulation of leaf senescence | 1.17E-03 |
| 31 | GO:0006401: RNA catabolic process | 1.17E-03 |
| 32 | GO:0006368: transcription elongation from RNA polymerase II promoter | 1.17E-03 |
| 33 | GO:2000014: regulation of endosperm development | 1.17E-03 |
| 34 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.20E-03 |
| 35 | GO:0006102: isocitrate metabolic process | 1.34E-03 |
| 36 | GO:0007155: cell adhesion | 1.34E-03 |
| 37 | GO:0010928: regulation of auxin mediated signaling pathway | 1.34E-03 |
| 38 | GO:0035265: organ growth | 1.34E-03 |
| 39 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.34E-03 |
| 40 | GO:0006002: fructose 6-phosphate metabolic process | 1.53E-03 |
| 41 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 1.73E-03 |
| 42 | GO:2000024: regulation of leaf development | 1.73E-03 |
| 43 | GO:0010332: response to gamma radiation | 1.73E-03 |
| 44 | GO:0000103: sulfate assimilation | 2.14E-03 |
| 45 | GO:0016441: posttranscriptional gene silencing | 2.14E-03 |
| 46 | GO:0051555: flavonol biosynthetic process | 2.14E-03 |
| 47 | GO:0006096: glycolytic process | 2.24E-03 |
| 48 | GO:0030036: actin cytoskeleton organization | 2.82E-03 |
| 49 | GO:0055046: microgametogenesis | 2.82E-03 |
| 50 | GO:0010053: root epidermal cell differentiation | 3.30E-03 |
| 51 | GO:0009225: nucleotide-sugar metabolic process | 3.30E-03 |
| 52 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.56E-03 |
| 53 | GO:0000162: tryptophan biosynthetic process | 3.56E-03 |
| 54 | GO:0051017: actin filament bundle assembly | 3.81E-03 |
| 55 | GO:0009116: nucleoside metabolic process | 3.81E-03 |
| 56 | GO:0030150: protein import into mitochondrial matrix | 3.81E-03 |
| 57 | GO:0009411: response to UV | 4.91E-03 |
| 58 | GO:0042127: regulation of cell proliferation | 5.20E-03 |
| 59 | GO:0008284: positive regulation of cell proliferation | 5.50E-03 |
| 60 | GO:0006662: glycerol ether metabolic process | 6.11E-03 |
| 61 | GO:0009960: endosperm development | 6.11E-03 |
| 62 | GO:0006891: intra-Golgi vesicle-mediated transport | 7.07E-03 |
| 63 | GO:0016032: viral process | 7.40E-03 |
| 64 | GO:0030163: protein catabolic process | 7.73E-03 |
| 65 | GO:0001666: response to hypoxia | 9.13E-03 |
| 66 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 9.50E-03 |
| 67 | GO:0009816: defense response to bacterium, incompatible interaction | 9.50E-03 |
| 68 | GO:0006886: intracellular protein transport | 1.09E-02 |
| 69 | GO:0048767: root hair elongation | 1.14E-02 |
| 70 | GO:0006499: N-terminal protein myristoylation | 1.18E-02 |
| 71 | GO:0034599: cellular response to oxidative stress | 1.34E-02 |
| 72 | GO:0006099: tricarboxylic acid cycle | 1.34E-02 |
| 73 | GO:0006631: fatty acid metabolic process | 1.47E-02 |
| 74 | GO:0008283: cell proliferation | 1.56E-02 |
| 75 | GO:0010114: response to red light | 1.56E-02 |
| 76 | GO:0051707: response to other organism | 1.56E-02 |
| 77 | GO:0000209: protein polyubiquitination | 1.60E-02 |
| 78 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.78E-02 |
| 79 | GO:0009846: pollen germination | 1.83E-02 |
| 80 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.97E-02 |
| 81 | GO:0010224: response to UV-B | 1.97E-02 |
| 82 | GO:0009555: pollen development | 2.33E-02 |
| 83 | GO:0009058: biosynthetic process | 3.01E-02 |
| 84 | GO:0006457: protein folding | 3.01E-02 |
| 85 | GO:0006633: fatty acid biosynthetic process | 3.41E-02 |
| 86 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.77E-02 |
| 87 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.95E-02 |
| 88 | GO:0006470: protein dephosphorylation | 4.01E-02 |
| 89 | GO:0042742: defense response to bacterium | 4.69E-02 |
| 90 | GO:0006979: response to oxidative stress | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 2 | GO:0061133: endopeptidase activator activity | 0.00E+00 |
| 3 | GO:0034338: short-chain carboxylesterase activity | 0.00E+00 |
| 4 | GO:0016768: spermine synthase activity | 6.91E-05 |
| 5 | GO:0050577: GDP-L-fucose synthase activity | 6.91E-05 |
| 6 | GO:0008460: dTDP-glucose 4,6-dehydratase activity | 1.66E-04 |
| 7 | GO:0003994: aconitate hydratase activity | 1.66E-04 |
| 8 | GO:0004766: spermidine synthase activity | 1.66E-04 |
| 9 | GO:0010280: UDP-L-rhamnose synthase activity | 1.66E-04 |
| 10 | GO:0000774: adenyl-nucleotide exchange factor activity | 1.66E-04 |
| 11 | GO:0050377: UDP-glucose 4,6-dehydratase activity | 1.66E-04 |
| 12 | GO:0000975: regulatory region DNA binding | 2.81E-04 |
| 13 | GO:0004749: ribose phosphate diphosphokinase activity | 4.06E-04 |
| 14 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 4.06E-04 |
| 15 | GO:0016853: isomerase activity | 4.23E-04 |
| 16 | GO:0070628: proteasome binding | 5.42E-04 |
| 17 | GO:0004834: tryptophan synthase activity | 5.42E-04 |
| 18 | GO:0000993: RNA polymerase II core binding | 5.42E-04 |
| 19 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 6.87E-04 |
| 20 | GO:0004623: phospholipase A2 activity | 6.87E-04 |
| 21 | GO:0004656: procollagen-proline 4-dioxygenase activity | 9.99E-04 |
| 22 | GO:0008320: protein transmembrane transporter activity | 1.17E-03 |
| 23 | GO:0003872: 6-phosphofructokinase activity | 1.17E-03 |
| 24 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.34E-03 |
| 25 | GO:0045309: protein phosphorylated amino acid binding | 1.93E-03 |
| 26 | GO:0030955: potassium ion binding | 1.93E-03 |
| 27 | GO:0004743: pyruvate kinase activity | 1.93E-03 |
| 28 | GO:0030234: enzyme regulator activity | 2.14E-03 |
| 29 | GO:0019904: protein domain specific binding | 2.36E-03 |
| 30 | GO:0004175: endopeptidase activity | 3.06E-03 |
| 31 | GO:0004867: serine-type endopeptidase inhibitor activity | 3.30E-03 |
| 32 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.45E-03 |
| 33 | GO:0030170: pyridoxal phosphate binding | 3.72E-03 |
| 34 | GO:0031418: L-ascorbic acid binding | 3.81E-03 |
| 35 | GO:0043130: ubiquitin binding | 3.81E-03 |
| 36 | GO:0051087: chaperone binding | 4.08E-03 |
| 37 | GO:0004298: threonine-type endopeptidase activity | 4.35E-03 |
| 38 | GO:0047134: protein-disulfide reductase activity | 5.50E-03 |
| 39 | GO:0005102: receptor binding | 5.50E-03 |
| 40 | GO:0004402: histone acetyltransferase activity | 5.80E-03 |
| 41 | GO:0050662: coenzyme binding | 6.42E-03 |
| 42 | GO:0004791: thioredoxin-disulfide reductase activity | 6.42E-03 |
| 43 | GO:0005507: copper ion binding | 6.70E-03 |
| 44 | GO:0000287: magnesium ion binding | 7.00E-03 |
| 45 | GO:0004518: nuclease activity | 7.40E-03 |
| 46 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.73E-03 |
| 47 | GO:0051015: actin filament binding | 7.73E-03 |
| 48 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.10E-02 |
| 49 | GO:0042803: protein homodimerization activity | 1.11E-02 |
| 50 | GO:0004222: metalloendopeptidase activity | 1.18E-02 |
| 51 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.30E-02 |
| 52 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.43E-02 |
| 53 | GO:0051082: unfolded protein binding | 2.47E-02 |
| 54 | GO:0015035: protein disulfide oxidoreductase activity | 2.52E-02 |
| 55 | GO:0008565: protein transporter activity | 3.30E-02 |
| 56 | GO:0005506: iron ion binding | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008023: transcription elongation factor complex | 6.91E-05 |
| 2 | GO:0001405: presequence translocase-associated import motor | 6.91E-05 |
| 3 | GO:0008541: proteasome regulatory particle, lid subcomplex | 8.80E-05 |
| 4 | GO:0000502: proteasome complex | 1.74E-04 |
| 5 | GO:0033588: Elongator holoenzyme complex | 4.06E-04 |
| 6 | GO:0032432: actin filament bundle | 4.06E-04 |
| 7 | GO:0005945: 6-phosphofructokinase complex | 6.87E-04 |
| 8 | GO:0005789: endoplasmic reticulum membrane | 9.31E-04 |
| 9 | GO:0016272: prefoldin complex | 9.99E-04 |
| 10 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 1.17E-03 |
| 11 | GO:0000123: histone acetyltransferase complex | 1.17E-03 |
| 12 | GO:0005829: cytosol | 1.60E-03 |
| 13 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.93E-03 |
| 14 | GO:0005884: actin filament | 2.36E-03 |
| 15 | GO:0005795: Golgi stack | 3.30E-03 |
| 16 | GO:0005737: cytoplasm | 4.17E-03 |
| 17 | GO:0005839: proteasome core complex | 4.35E-03 |
| 18 | GO:0005615: extracellular space | 5.16E-03 |
| 19 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 5.20E-03 |
| 20 | GO:0032580: Golgi cisterna membrane | 8.08E-03 |
| 21 | GO:0031902: late endosome membrane | 1.47E-02 |
| 22 | GO:0005635: nuclear envelope | 2.02E-02 |
| 23 | GO:0005834: heterotrimeric G-protein complex | 2.27E-02 |
| 24 | GO:0009543: chloroplast thylakoid lumen | 2.90E-02 |
| 25 | GO:0005759: mitochondrial matrix | 3.41E-02 |
| 26 | GO:0005774: vacuolar membrane | 4.95E-02 |