Gene: AT2G35930
     

Gene description


TAIR ID: AT2G35930

Short description: plant U-box 23

Pathogen responsiveness: 2.43

General responsiveness: 1.51

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to chitin, defense response, protein autoubiquitination, protein ubiquitination, response to water deprivation, respiratory burst involved in defense response


GO cellular component


cytoplasm, cytosol


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF04564, U-box domain
PfamPF04078, Cell differentiation family, Rcd1-like
SMARTSM00504, Ubox

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G18770, AT5G11260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


82 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, ERF104 ox, water 4 hCol, ERF104 ox, Flg22 4 h3.084.72E-02
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h5.346.99E-04
GSE11807Col, mpk6 ko, water 4 hCol, mpk6 ko, Flg22 4 h4.674.31E-03
GSE12856Col, WT, controlCol, WT, Bg h2.814.49E-07
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.278.03E-08
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h1.971.33E-05
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.454.57E-08
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d2.583.29E-08
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min4.053.81E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-2.831.66E-05
GSE17464Laer, controlLaer, Flg22 1 h2.481.33E-04
GSE17464Laer, controlLaer, Flg22 2 h1.952.24E-03
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.947.22E-06
GSE17464Penta, controlPenta, Flg22 2 h2.061.42E-03
GSE17464Penta, controlPenta, Flg22 2 h1.775.19E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.246.45E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.686.79E-07
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.147.38E-06
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h2.192.22E-11
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h1.534.67E-09
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h3.763.40E-08
GSE2169Col, WT, waterCol, WT, chitin 30 min2.281.58E-10
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.911.87E-12
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.706.67E-12
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.534.20E-07
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min3.219.21E-07
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.581.47E-02
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d2.264.15E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.595.79E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.793.85E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.822.15E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.221.02E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.552.56E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.625.65E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.111.21E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.183.87E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.992.57E-09
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.261.53E-15
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.601.22E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.652.96E-15
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.729.82E-15
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.691.66E-04
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h3.815.09E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h6.181.90E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h1.906.63E-08
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h4.121.42E-12
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h1.974.95E-08
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h4.453.26E-13
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h1.633.32E-04
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.142.42E-06
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.579.28E-04
GSE56094Col, WT, control 2 hCol, WT, hrpA- 2 h2.629.02E-08
GSE56094Col, WT, control 3 hCol, WT, PstDC3000 3 h2.046.87E-05
GSE56094Col, WT, control 3 hCol, WT, hrpA- 3 h3.132.19E-10
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h2.357.64E-07
GSE56094Col, WT, control 4 hCol, WT, hrpA- 4 h2.011.33E-04
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h2.214.86E-06
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h2.712.37E-08
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h2.011.27E-05
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h3.043.51E-10
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h2.682.89E-08
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h2.221.16E-06
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h1.771.14E-04
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h3.346.67E-09
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h1.911.63E-04
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h1.901.62E-04
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h4.956.05E-13
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h5.162.52E-13
GSE5615Col, WT, water 4 hCol, WT, LPS 4 h1.744.60E-03
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h2.764.11E-07
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h4.271.04E-09
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h2.411.18E-06
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h1.711.10E-04
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 HrpA- 4 h1.706.23E-04
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.007.41E-04
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min3.344.04E-16
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h5.222.01E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h3.231.23E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min4.945.62E-05
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h4.031.53E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h3.479.27E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min3.908.72E-05






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