gene detail

Gene description

TAIR ID: AT2G34850

Short description: NAD(P)-binding Rossmann-fold superfamily protein

Pathogen responsiveness: -0.37

General responsiveness: -0.47

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

pollen tube development, capsule polysaccharide biosynthetic process, nucleotide-sugar metabolic process, galactose metabolic process, embryo development ending in seed dormancy, UDP-L-arabinose biosynthetic process

GO cellular component

Golgi apparatus, Golgi cisterna membrane, integral component of membrane

GO molecular function

catalytic activity, UDP-glucose 4-epimerase activity, UDP-arabinose 4-epimerase activity

Protein domain

Pfam	PF16363, GDP-mannose 4,6 dehydratase

Metabolic pathway

PWY-5114: UDP-sugars interconversion
PWY-63: UDP-L-arabinose biosynthesis I (from UDP-xylose)

KEGG pathway

PATH:ath00520: Amino sugar and nucleotide sugar metabolism

Transcriptional regulation

Regulator:
AT1G51600, AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

20 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	-3.02	7.51E-06
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.93	2.20E-03
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-2.53	2.81E-05
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.75	4.30E-09
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.13	1.73E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.56	7.26E-05
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.62	2.56E-15
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.86	2.64E-08
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.02	2.31E-10
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.85	2.08E-08
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.32	1.57E-12
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.88	3.12E-17
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	1.50	8.30E-06
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	1.71	2.23E-07
GSE56094	Col, WT, control 6 h	Col, WT, hrpA- 6 h	1.52	8.85E-06
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.68	3.32E-07
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	1.88	4.48E-08
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	2.03	2.93E-10
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	2.17	4.09E-10
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.89	3.96E-09