gene detail

Gene description

TAIR ID: AT2G34810

Short description: FAD-binding Berberine family protein

Pathogen responsiveness: 0.84

General responsiveness: 1.68

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to wounding, response to jasmonic acid, oxidation-reduction process

GO cellular component

cytoplasm, extracellular region

GO molecular function

flavin adenine dinucleotide binding, electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors

Protein domain

Pfam	PF08031, Berberine and berberine like
Pfam	PF01565, FAD binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

32 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	5.12	2.73E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	3.52	1.24E-07
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	3.48	2.01E-08
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.36	4.27E-07
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	3.34	9.38E-08
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	3.26	1.34E-07
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	3.23	2.34E-07
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	3.15	2.23E-05
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	3.03	1.63E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.97	1.02E-05

Showing 1 to 10 of 32 entries