Gene: AT2G34210
     


Gene description


TAIR ID: AT2G34210

Short description: Transcription elongation factor Spt5

Pathogen responsiveness: -2.28

General responsiveness: -2.96

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


translation, regulation of DNA-templated transcription, elongation, regulation of transcription from RNA polymerase II promoter, mRNA processing, translational elongation, transcription elongation from RNA polymerase II promoter, transcription, DNA-templated


GO cellular component


nucleus, ribosome, DSIF complex


GO molecular function


DNA-templated transcription, initiation, translation elongation factor activity, DNA binding, structural constituent of ribosome, mRNA binding


Protein domain


PfamPF00467, KOW motif
PfamPF11942, Spt5 transcription elongation factor, acidic N-terminal
PfamPF03439, Early transcription elongation factor of RNA pol II, NGN section
SMARTSM00738, NGN
SMARTSM00739, KOW

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600, AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network

GSE13739_WT_GO  view

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.058.91E-03
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-2.371.19E-02






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